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<biogps><data><item key="platform">6</item><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">mouse</item><item key="factors"><item><item key="GSM954975 1"/></item><item><item key="GSM954976 1"/></item></item><item key="id">6940</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-39064</item><item key="summary_wrapped">Roles of mesothelial cells (MCs) are poorly understood during liver development and injury. We identified podoplanin (Pdpn) as a cell...</item><item key="pubmed_id">23345421</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">0</item><item key="sample_count">2</item><item key="tags"><item>cell</item><item>genome</item><item>liver</item><item>surface</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">expression-data-from-developing-mouse-livers</item><item key="geo_id_plat">E-GEOD-39064_A-AFFY-45</item><item key="name">Expression data from developing mouse livers</item><item key="created">Nov.12, 2014</item><item key="summary">Roles of mesothelial cells (MCs) are poorly understood during liver development and injury. We identified podoplanin (Pdpn) as a cell surface markers for mesothelial cells in E12.5 mouse developing liver. To identify genes uniquely expressed in MCs, we isolated MCs from E12.5 mouse livers by FACS using anti-Pdpn antibodies and performed microarray analysis. The E12.5 liver was digested with trypsin-EDTA and incubated with antibodies against Pdpn.  MCs were isolated as Pdpn+ population by FACS. Total RNA was extracted with RNAqueous Micro (Ambion) and the probes for the microarray were synthesized using the Ovation RNA amplification system V2 and FL-Ovation cDNA Biotin module V2 (Nugen). The labeled probes were hybridized with GeneChip Mouse Genome 430 2.0 arrays (Affymetrix) and signals were analyzed with Genomic Suite software (Partek).</item><item key="geo_gse_id">E-GEOD-39064</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-39064/samples/</item></data></biogps>
