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Home › Dataset Library › Expression data of normal human extraocular muscle and strabismic human extraocular muscle

Dataset: Expression data of normal human extraocular muscle and strabismic human extraocular muscle

Human strabismic extraocular muscles (EOMs) differ from normal EOMs in structural and functional properties, but the gene expression...

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Human strabismic extraocular muscles (EOMs) differ from normal EOMs in structural and functional properties, but the gene expression profile of these two types of human EOM has not been examined. Differences in gene expression may inform about causes and effects of the strabismic condition in humans. Our samples are from human strabismic patients undergoing corrective surgery, and from human organ donors with no history of EOM disease. Microarray analysis showed that 604 genes in these samples have significantly different expression. Expression was predominantly up-regulated in genes involved in extracellular matrix structure and down-regulated in genes related to contractility. We used four normal samples and four strabismic samples. Three normal samples were from independent donors. One normal sample was a different piece of the same EOM from one of the 3 donors. All four strabismic samples were independent samples.

Species:
human

Samples:
8

Source:
E-GEOD-38780

PubMed:
22786898

Updated:
Dec.12, 2014

Registered:
Sep.19, 2014


Factors: (via ArrayExpress)
Sample SAMPLE WT (MG) PHENOTYPE AGE (YRS) ORGANISM PART SEX
GSM949388 56.9 normal 6 Extraocular muscle, Medial Rectus, right F
GSM949389 38.2 normal 6 Extraocular muscle, Medial Rectus, right F
GSM949390 79.7 normal 38 Extraocular muscle, Medial Rectus, right M
GSM94939 33 normal 17 Extraocular muscle, Medial Rectus, left F
GSM949392 na strabismus 9 Extraocular muscle, Lateral Rectus, right M
GSM949393 32 strabismus 63 Extraocular muscle, Medial Rectus, left F
GSM949394 28.4 strabismus 6 Extraocular muscle, Medial Rectus, right F
GSM949395 37 strabismus 12 Extraocular muscle, Medial Rectus, right F

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  • organ

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