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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="id">6900</item><item key="factors"><item><item key="GSM936877"><item key="genotype">wild type genotype</item></item></item><item><item key="GSM936877"><item key="genotype">wild type genotype</item></item></item><item><item key="GSM936877"><item key="genotype">wild type genotype</item></item></item><item><item key="GSM936877"><item key="genotype">wild type genotype</item></item></item><item><item key="GSM936877"><item key="genotype">wild type genotype</item></item></item><item><item key="GSM936877"><item key="genotype">wild type genotype</item></item></item><item><item key="GSM936877"><item key="genotype">wild type genotype</item></item></item><item><item key="GSM936877"><item key="genotype">wild type genotype</item></item></item><item><item key="GSM936885"><item key="genotype">R6/2::HDAC4het</item></item></item><item><item key="GSM936885"><item key="genotype">R6/2::HDAC4het</item></item></item><item><item key="GSM936885"><item key="genotype">R6/2::HDAC4het</item></item></item><item><item key="GSM936885"><item key="genotype">R6/2::HDAC4het</item></item></item><item><item key="GSM936885"><item key="genotype">R6/2::HDAC4het</item></item></item><item><item key="GSM936885"><item key="genotype">R6/2::HDAC4het</item></item></item><item><item key="GSM936885"><item key="genotype">R6/2::HDAC4het</item></item></item><item><item key="GSM936885"><item key="genotype">R6/2::HDAC4het</item></item></item><item><item key="GSM936893"><item key="genotype">R6/2</item></item></item><item><item key="GSM936893"><item key="genotype">R6/2</item></item></item><item><item key="GSM936893"><item key="genotype">R6/2</item></item></item><item><item key="GSM936893"><item key="genotype">R6/2</item></item></item><item><item key="GSM936893"><item key="genotype">R6/2</item></item></item><item><item key="GSM936893"><item key="genotype">R6/2</item></item></item><item><item key="GSM936893"><item key="genotype">R6/2</item></item></item><item><item key="GSM936893"><item key="genotype">R6/2</item></item></item><item><item key="GSM936893"><item key="genotype">R6/2</item></item></item><item><item key="GSM936902"><item key="genotype">HDAC4het</item></item></item><item><item key="GSM936902"><item key="genotype">HDAC4het</item></item></item><item><item key="GSM936902"><item key="genotype">HDAC4het</item></item></item><item><item key="GSM936902"><item key="genotype">HDAC4het</item></item></item><item><item key="GSM936902"><item key="genotype">HDAC4het</item></item></item><item><item key="GSM936902"><item key="genotype">HDAC4het</item></item></item><item><item key="GSM936902"><item key="genotype">HDAC4het</item></item></item><item><item key="GSM936902"><item key="genotype">HDAC4het</item></item></item><item><item key="GSM936902"><item key="genotype">HDAC4het</item></item></item></item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">6</item><item key="summary_wrapped">[u"Histone deacetylase (HDAC) 4 is a transcriptional repressor that contains a glutamine rich domain. We hypothesised that it may be...</item><item key="pubmed_id">24302884</item><item key="geo_gse_id">E-GEOD-38219</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">1</item><item key="sample_count">34</item><item key="tags"><item>disease</item><item>glutamine</item><item>histone</item><item>huntington's disease</item><item>protein</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">gene-expression-data-from-cortex-of-15-week-old-wi</item><item key="geo_id_plat">E-GEOD-38219_A-AFFY-45</item><item key="name">Gene expression data from cortex of 15 week old wild type, R6/2, HDAC4het and R6/2::HDAC4het mice</item><item key="created">Nov.12, 2014</item><item key="summary">[u"Histone deacetylase (HDAC) 4 is a transcriptional repressor that contains a glutamine rich domain. We hypothesised that it may be involved in the molecular pathogenesis of Huntington's disease (HD), a protein folding neurodegenerative disorder caused by an aggregation-prone polyglutamine expansion and transcriptional dysregulation.   We found that HDAC4 interacts with huntingtin in a polyglutamine-length dependent manner and co-localises with cytoplasmic inclusions. We show that HDAC4 reduction delayed cytoplasmic aggregate formation, restored Bdnf transcript levels and rescued neuronal and cortico-striatal synaptic function in HD mouse models. This was accompanied by an improvement in motor co-ordination, neurological phenotypes and increased lifespan. Surprisingly, HDAC4 reduction had no effect on global transcriptional dysfunction and did not modulate nuclear huntingtin aggregation.     Our results define a crucial role for cytoplasmic aggregation in the molecular pathology of HD. HDAC4 reduction presents a novel strategy for targeting huntingtin aggregation which may be amenable to small molecule therapeutics. mRNA expression analysis was performed by microarray in 15 weeks old WT (n=8), R6/2 (n=9), HDAC4het (n=8) and Double R6/2::HDAC4het (n=9) mice. Microarray quality control was performed using the software package provided on RACE (", {u'a': {u'href': u'http://race.unil.ch', u'target': u'_blank', u'$': u'http://race.unil.ch'}}, u').']</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-38219</item><item key="species">mouse</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-38219/samples/</item></data></biogps>
