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Home › Dataset Library › Gene expression data from cortex of 9 week old wild type, R6/2, HDAC4het and R6/2::HDAC4het mice

Dataset: Gene expression data from cortex of 9 week old wild type, R6/2, HDAC4het and R6/2::HDAC4het mice

[u"Histone deacetylase (HDAC) 4 is a transcriptional repressor that contains a glutamine rich domain. We hypothesised that it may be...

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[u"Histone deacetylase (HDAC) 4 is a transcriptional repressor that contains a glutamine rich domain. We hypothesised that it may be involved in the molecular pathogenesis of Huntington's disease (HD), a protein folding neurodegenerative disorder caused by an aggregation-prone polyglutamine expansion and transcriptional dysregulation. We found that HDAC4 interacts with huntingtin in a polyglutamine-length dependent manner and co-localises with cytoplasmic inclusions. We show that HDAC4 reduction delayed cytoplasmic aggregate formation, restored Bdnf transcript levels and rescued neuronal and cortico-striatal synaptic function in HD mouse models. This was accompanied by an improvement in motor co-ordination, neurological phenotypes and increased lifespan. Surprisingly, HDAC4 reduction had no effect on global transcriptional dysfunction and did not modulate nuclear huntingtin aggregation. Our results define a crucial role for cytoplasmic aggregation in the molecular pathology of HD. HDAC4 reduction presents a novel strategy for targeting huntingtin aggregation which may be amenable to small molecule therapeutics. mRNA expression analysis was performed by microarray in 9 weeks old WT (n=9), R6/2 (n=9), HDAC4het (n=9) and Double R6/2::HDAC4het (n=10) mice. Microarray quality control was performed using the software package provided on RACE (", {u'a': {u'href': u'http://race.unil.ch', u'target': u'_blank', u'$': u'http://race.unil.ch'}}, u').']

Species:
mouse

Samples:
37

Source:
E-GEOD-38218

PubMed:
24302884

Updated:
Dec.12, 2014

Registered:
Nov.12, 2014


Factors: (via ArrayExpress)
Sample genotype
GSM936840 wild type genotype
GSM936840 wild type genotype
GSM936840 wild type genotype
GSM936840 wild type genotype
GSM936840 wild type genotype
GSM936840 wild type genotype
GSM936840 wild type genotype
GSM936840 wild type genotype
GSM936840 wild type genotype
GSM936849 HDAC4het
GSM936849 HDAC4het
GSM936849 HDAC4het
GSM936849 HDAC4het
GSM936849 HDAC4het
GSM936849 HDAC4het
GSM936849 HDAC4het
GSM936849 HDAC4het
GSM936849 HDAC4het
GSM936858 R6/2
GSM936858 R6/2
GSM936858 R6/2
GSM936858 R6/2
GSM936858 R6/2
GSM936858 R6/2
GSM936858 R6/2
GSM936858 R6/2
GSM936858 R6/2
GSM936867 R6/2::HDAC4het
GSM936867 R6/2::HDAC4het
GSM936867 R6/2::HDAC4het
GSM936867 R6/2::HDAC4het
GSM936867 R6/2::HDAC4het
GSM936867 R6/2::HDAC4het
GSM936867 R6/2::HDAC4het
GSM936867 R6/2::HDAC4het
GSM936867 R6/2::HDAC4het
GSM936867 R6/2::HDAC4het

Tags

  • disease
  • glutamine
  • histone
  • huntington's disease
  • protein

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