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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">mouse</item><item key="factors"><item><item key="GSM932887"><item key="GENOTYPE">RAG-2-deficient</item></item></item><item><item key="GSM932887"><item key="GENOTYPE">RAG-2-deficient</item></item></item><item><item key="GSM932887"><item key="GENOTYPE">RAG-2-deficient</item></item></item><item><item key="GSM932890"><item key="GENOTYPE">Artemis-deficient</item></item></item><item><item key="GSM932890"><item key="GENOTYPE">Artemis-deficient</item></item></item><item><item key="GSM932890"><item key="GENOTYPE">Artemis-deficient</item></item></item></item><item key="id">6887</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">6</item><item key="summary_wrapped">The objective is to identify genes that are differentially expressed following the introduction of DNA double-strand breaks (DSBs) by the...</item><item key="geo_gse_id">E-GEOD-38044</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">1</item><item key="sample_count">6</item><item key="tags"><item>cell</item><item>genome</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">gene-activation-by-rag-mediated-dna-double-strand</item><item key="geo_id_plat">E-GEOD-38044_A-AFFY-45</item><item key="name">Gene activation by Rag-mediated DNA double-strand breaks in G1-phase murine pre-B cells</item><item key="created">Nov.12, 2014</item><item key="summary">The objective is to identify genes that are differentially expressed following the introduction of DNA double-strand breaks (DSBs) by the Rag proteins in murine pre-B cells. Cells lacking Artemis are used since the Rag-induced DSBs will not be repaired, and thus, will provide a continuous stimulus to the cell. Murine v-abl-transformed pre-B cells were treated with 3 uM STI571 for 48 hours. Cell types included RAG-2-deficient (3 biological replicates) and Artemis-deficient (3 biological replicates) G1-phase pre-B cells. Each sample was hybridized once using Affymetrix Mouse Genome 2.0 GeneChip arrays (Mouse 430 v2, Affymetrix, Santa Clara, CA). Data were analyzed using the RAG-2-deficient samples as the controls.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-38044</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-38044/samples/</item></data></biogps>
