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key="SEX">male</item></item></item><item><item key="GSM876842"><item key="AGE">34</item><item key="RACE">White</item><item key="PHENOTYPE">normal (control)</item><item key="ORGANISM PART">White matter</item><item key="SEX">male</item></item></item><item><item key="GSM876843"><item key="AGE">48</item><item key="RACE">White</item><item key="PHENOTYPE">normal (control)</item><item key="ORGANISM PART">White matter</item><item key="SEX">female</item></item></item><item><item key="GSM876844"><item key="AGE">49</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected</item><item key="ORGANISM PART">White matter</item><item key="SEX">male</item></item></item><item><item key="GSM876845"><item key="AGE">47</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected</item><item key="ORGANISM PART">White matter</item><item key="SEX">male</item></item></item><item><item key="GSM876846"><item key="AGE">44</item><item key="RACE">White</item><item key="PHENOTYPE">HIV 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key="SEX">male</item></item></item><item><item key="GSM87685"><item key="AGE">35</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected with neurocognitive impairment (HAD: HIV-associated dementia)</item><item key="ORGANISM PART">White matter</item><item key="SEX">male</item></item></item><item><item key="GSM876852"><item key="AGE">57</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected with neurocognitive impairment (HAD: HIV-associated dementia)</item><item key="ORGANISM PART">White matter</item><item key="SEX">male</item></item></item><item><item key="GSM876853"><item key="AGE">36</item><item key="RACE">Hispanic</item><item key="PHENOTYPE">HIV Infected with neurocognitive impairment (HAD: HIV-associated dementia)</item><item key="ORGANISM PART">White matter</item><item key="SEX">male</item></item></item><item><item key="GSM876854"><item key="AGE">52</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected with neurocognitive impairment 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key="RACE">White</item><item key="PHENOTYPE">HIV Infected with HAD and HIV encephalitis (HIVE)</item><item key="ORGANISM PART">White matter</item><item key="SEX">male</item></item></item><item><item key="GSM876859"><item key="AGE">39</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected with HAD and HIV encephalitis (HIVE)</item><item key="ORGANISM PART">White matter</item><item key="SEX">male</item></item></item><item><item key="GSM876860"><item key="AGE">55</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected with HAD and HIV encephalitis (HIVE)</item><item key="ORGANISM PART">White matter</item><item key="SEX">male</item></item></item><item><item key="GSM87686"><item key="AGE">41</item><item key="RACE">Hispanic</item><item key="PHENOTYPE">HIV Infected with HAD and HIV encephalitis (HIVE)</item><item key="ORGANISM PART">White matter</item><item key="SEX">male</item></item></item><item><item key="GSM876862"><item key="AGE">44</item><item key="RACE">White</item><item key="PHENOTYPE">normal (control)</item><item key="ORGANISM PART">Frontal cortex</item><item key="SEX">male</item></item></item><item><item key="GSM876863"><item key="AGE">53</item><item key="RACE">White</item><item key="PHENOTYPE">normal (control)</item><item key="ORGANISM PART">Frontal cortex</item><item key="SEX">male</item></item></item><item><item key="GSM876864"><item key="AGE">63</item><item key="RACE">Hispanic</item><item key="PHENOTYPE">normal (control)</item><item key="ORGANISM PART">Frontal cortex</item><item key="SEX">male</item></item></item><item><item key="GSM876865"><item key="AGE">58</item><item key="RACE">White</item><item key="PHENOTYPE">normal (control)</item><item key="ORGANISM PART">Frontal cortex</item><item key="SEX">male</item></item></item><item><item key="GSM876866"><item key="AGE">34</item><item key="RACE">White</item><item key="PHENOTYPE">normal (control)</item><item key="ORGANISM PART">Frontal cortex</item><item key="SEX">male</item></item></item><item><item key="GSM876867"><item key="AGE">48</item><item key="RACE">White</item><item key="PHENOTYPE">normal (control)</item><item key="ORGANISM PART">Frontal cortex</item><item key="SEX">female</item></item></item><item><item key="GSM876868"><item key="AGE">49</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected</item><item key="ORGANISM PART">Frontal cortex</item><item key="SEX">male</item></item></item><item><item key="GSM876869"><item key="AGE">47</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected</item><item key="ORGANISM PART">Frontal cortex</item><item key="SEX">male</item></item></item><item><item key="GSM876870"><item key="AGE">44</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected</item><item key="ORGANISM PART">Frontal cortex</item><item key="SEX">male</item></item></item><item><item key="GSM87687"><item key="AGE">59</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected</item><item key="ORGANISM PART">Frontal cortex</item><item key="SEX">male</item></item></item><item><item key="GSM876872"><item key="AGE">60</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected</item><item key="ORGANISM PART">Frontal cortex</item><item key="SEX">male</item></item></item><item><item key="GSM876873"><item key="AGE">39</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected</item><item key="ORGANISM PART">Frontal cortex</item><item key="SEX">male</item></item></item><item><item key="GSM876874"><item key="AGE">33</item><item key="RACE">Black</item><item key="PHENOTYPE">HIV Infected with neurocognitive impairment (HAD: HIV-associated dementia)</item><item key="ORGANISM PART">Frontal cortex</item><item key="SEX">male</item></item></item><item><item key="GSM876875"><item key="AGE">35</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected with neurocognitive impairment (HAD: HIV-associated dementia)</item><item key="ORGANISM PART">Frontal cortex</item><item key="SEX">male</item></item></item><item><item key="GSM876876"><item key="AGE">57</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected with neurocognitive impairment (HAD: HIV-associated dementia)</item><item key="ORGANISM PART">Frontal cortex</item><item key="SEX">male</item></item></item><item><item key="GSM876877"><item key="AGE">36</item><item key="RACE">Hispanic</item><item key="PHENOTYPE">HIV Infected with neurocognitive impairment (HAD: HIV-associated dementia)</item><item key="ORGANISM PART">Frontal cortex</item><item key="SEX">male</item></item></item><item><item key="GSM876878"><item key="AGE">52</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected with neurocognitive impairment (HAD: HIV-associated dementia)</item><item key="ORGANISM PART">Frontal cortex</item><item key="SEX">male</item></item></item><item><item key="GSM876879"><item key="AGE">41</item><item key="RACE">Hispanic</item><item key="PHENOTYPE">HIV Infected with neurocognitive impairment (HAD: HIV-associated dementia)</item><item key="ORGANISM PART">Frontal cortex</item><item key="SEX">male</item></item></item><item><item key="GSM876878"><item key="AGE">52</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected with neurocognitive impairment (HAD: HIV-associated dementia)</item><item key="ORGANISM PART">Frontal cortex</item><item key="SEX">male</item></item></item><item><item key="GSM87688"><item key="AGE">48</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected with HAD and HIV encephalitis (HIVE)</item><item key="ORGANISM PART">Frontal cortex</item><item key="SEX">male</item></item></item><item><item key="GSM876882"><item key="AGE">32</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected with HAD and HIV encephalitis (HIVE)</item><item key="ORGANISM PART">Frontal cortex</item><item key="SEX">male</item></item></item><item><item key="GSM876883"><item key="AGE">39</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected with HAD and HIV encephalitis (HIVE)</item><item key="ORGANISM PART">Frontal cortex</item><item key="SEX">male</item></item></item><item><item key="GSM876884"><item key="AGE">55</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected with HAD and HIV encephalitis (HIVE)</item><item key="ORGANISM PART">Frontal cortex</item><item key="SEX">male</item></item></item><item><item key="GSM876885"><item key="AGE">41</item><item key="RACE">Hispanic</item><item key="PHENOTYPE">HIV Infected with HAD and HIV encephalitis (HIVE)</item><item key="ORGANISM PART">Frontal cortex</item><item key="SEX">male</item></item></item><item><item key="GSM876886"><item key="AGE">44</item><item key="RACE">White</item><item key="PHENOTYPE">normal (control)</item><item key="ORGANISM PART">Basal ganglia</item><item key="SEX">male</item></item></item><item><item key="GSM876887"><item key="AGE">53</item><item key="RACE">White</item><item key="PHENOTYPE">normal (control)</item><item key="ORGANISM PART">Basal ganglia</item><item key="SEX">male</item></item></item><item><item key="GSM876888"><item key="AGE">63</item><item key="RACE">Hispanic</item><item key="PHENOTYPE">normal (control)</item><item key="ORGANISM PART">Basal ganglia</item><item key="SEX">male</item></item></item><item><item key="GSM876889"><item key="AGE">58</item><item key="RACE">White</item><item key="PHENOTYPE">normal (control)</item><item key="ORGANISM PART">Basal ganglia</item><item key="SEX">male</item></item></item><item><item key="GSM876890"><item key="AGE">34</item><item key="RACE">White</item><item key="PHENOTYPE">normal (control)</item><item key="ORGANISM PART">Basal ganglia</item><item key="SEX">male</item></item></item><item><item key="GSM87689"><item key="AGE">48</item><item key="RACE">White</item><item key="PHENOTYPE">normal (control)</item><item key="ORGANISM PART">Basal ganglia</item><item key="SEX">female</item></item></item><item><item key="GSM876892"><item key="AGE">49</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected</item><item key="ORGANISM PART">Basal ganglia</item><item key="SEX">male</item></item></item><item><item key="GSM876893"><item key="AGE">47</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected</item><item key="ORGANISM PART">Basal ganglia</item><item key="SEX">male</item></item></item><item><item key="GSM876894"><item key="AGE">44</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected</item><item key="ORGANISM PART">Basal ganglia</item><item key="SEX">male</item></item></item><item><item key="GSM876895"><item key="AGE">59</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected</item><item key="ORGANISM PART">Basal ganglia</item><item key="SEX">male</item></item></item><item><item key="GSM876896"><item key="AGE">60</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected</item><item key="ORGANISM PART">Basal ganglia</item><item key="SEX">male</item></item></item><item><item key="GSM876897"><item key="AGE">39</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected</item><item key="ORGANISM PART">Basal ganglia</item><item key="SEX">male</item></item></item><item><item key="GSM876898"><item key="AGE">33</item><item key="RACE">Black</item><item key="PHENOTYPE">HIV Infected with HAD</item><item key="ORGANISM PART">Basal ganglia</item><item key="SEX">male</item></item></item><item><item key="GSM876899"><item key="AGE">35</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected with HAD</item><item key="ORGANISM PART">Basal ganglia</item><item key="SEX">male</item></item></item><item><item key="GSM876900"><item key="AGE">57</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected with HAD</item><item key="ORGANISM PART">Basal ganglia</item><item key="SEX">male</item></item></item><item><item key="GSM87690"><item key="AGE">36</item><item key="RACE">Hispanic</item><item key="PHENOTYPE">HIV Infected with HAD</item><item key="ORGANISM PART">Basal ganglia</item><item key="SEX">male</item></item></item><item><item key="GSM876902"><item key="AGE">52</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected with HAD</item><item key="ORGANISM PART">Basal ganglia</item><item key="SEX">male</item></item></item><item><item key="GSM876903"><item key="AGE">41</item><item key="RACE">Hispanic</item><item key="PHENOTYPE">HIV Infected with HAD</item><item key="ORGANISM PART">Basal ganglia</item><item key="SEX">male</item></item></item><item><item key="GSM876902"><item key="AGE">52</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected with HAD</item><item key="ORGANISM PART">Basal ganglia</item><item key="SEX">male</item></item></item><item><item key="GSM876905"><item key="AGE">48</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected with HAD and encephalitis</item><item key="ORGANISM PART">Basal ganglia</item><item key="SEX">male</item></item></item><item><item key="GSM876906"><item key="AGE">32</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected with HAD and encephalitis</item><item key="ORGANISM PART">Basal ganglia</item><item key="SEX">male</item></item></item><item><item key="GSM876907"><item key="AGE">39</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected with HAD and encephalitis</item><item key="ORGANISM PART">Basal ganglia</item><item key="SEX">male</item></item></item><item><item key="GSM876908"><item key="AGE">55</item><item key="RACE">White</item><item key="PHENOTYPE">HIV Infected with HAD and encephalitis</item><item key="ORGANISM PART">Basal ganglia</item><item key="SEX">male</item></item></item><item><item key="GSM876909"><item key="AGE">41</item><item key="RACE">Hispanic</item><item key="PHENOTYPE">HIV Infected with HAD and encephalitis</item><item key="ORGANISM PART">Basal ganglia</item><item key="SEX">male</item></item></item></item><item key="id">4420</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">4</item><item key="summary_wrapped">Finding the differences in gene expression in three regions of the brai, basal ganglia, white matter, and frontal cortex, in normal, HIV...</item><item key="geo_gse_id">E-GEOD-35864</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">5</item><item key="sample_count">72</item><item key="tags"><item>basal</item><item>brain</item><item>cortex</item><item>dementia</item><item>encephalitis</item><item>frontal</item><item>hiv infection</item><item>hiv-associated dementia</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">host-response-and-dysfunction-in-the-cns-during-ch</item><item key="geo_id_plat">E-GEOD-35864_A-AFFY-44</item><item key="name">Host response and dysfunction in the CNS during chronic simian immunodeficiency virus infection [human study]</item><item key="created">Sep.19, 2014</item><item key="summary">Finding the differences in gene expression in three regions of the brai, basal ganglia, white matter, and frontal cortex, in normal, HIV infected, HIV inefected with neurocognitive impairment, and HIV infected with both neurocognitive impairment and encephalitis patients. We used microarrays to identify differentially expressed genes in normal, HIV infected, HIV inefected with neurocognitive impairment, and HIV infected with both neurocognitive impairment and encephalitis patients. Samples from three different brain regions from normal, HIV infected, HIV infected with neurocognitive impairment (HAD: HIV-associated dementia), and HIV infected with both neurocognitive impairment and encephalitis (HIVE: HIV encephalitis) patients were collected for RNA isolation and supsequent Affymetrix microarray analysis. We sought to obtain gene expression levels in different brain regions to find implication of HIV and the neurological impairment and inflammation associated with HIV infection.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-35864</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-35864/samples/</item></data></biogps>
