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<biogps><data><item key="platform">4</item><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">human</item><item key="factors"><item><item key="GSM873748"><item key="PROTOCOL">stimuated with AutoB1S1 plasma</item></item></item><item><item key="GSM873749"><item key="PROTOCOL">stimuated with AutoB1S2 plasma</item></item></item><item><item key="GSM873750"><item key="PROTOCOL">stimuated with AutoB1S3 plasma</item></item></item><item><item key="GSM87375"><item key="PROTOCOL">stimuated with AutoB3W1 plasma</item></item></item><item><item key="GSM873752"><item key="PROTOCOL">stimuated with AutoB3W1+2 plasma</item></item></item><item><item key="GSM873753"><item key="PROTOCOL">stimulated with CF4017 plasma</item></item></item><item><item key="GSM873754"><item key="PROTOCOL">stimulated with CF4024 plasma</item></item></item><item><item key="GSM873755"><item key="PROTOCOL">stimulated with CF4026 plasma</item></item></item><item><item key="GSM873756"><item key="PROTOCOL">stimulated with CF4045 plasma</item></item></item><item><item key="GSM873758"><item key="PROTOCOL">stimulated with CF4047 plasma</item></item></item><item><item key="GSM873759"><item key="PROTOCOL">stimulated with CF4087 plasma</item></item></item><item><item key="GSM873760"><item key="PROTOCOL">stimulated with CF4091 plasma</item></item></item><item><item key="GSM87376"><item key="PROTOCOL">stimulated with CF4107 plasma</item></item></item><item><item key="GSM873762"><item key="PROTOCOL">stimulated with CF4088 plasma</item></item></item><item><item key="GSM873763"><item key="PROTOCOL">stimulated with CF4133 plasma</item></item></item><item><item key="GSM873764"><item key="PROTOCOL">stimulated with CF4138 plasma</item></item></item><item><item key="GSM873765"><item key="PROTOCOL">stimulated with CF4157 plasma</item></item></item><item><item key="GSM873766"><item key="PROTOCOL">stimulated with CF4184 plasma</item></item></item><item><item key="GSM873767"><item key="PROTOCOL">stimulated with CF4256 plasma</item></item></item><item><item key="GSM873768"><item key="PROTOCOL">stimulated with CF4265 plasma</item></item></item><item><item key="GSM873769"><item key="PROTOCOL">stimulated with CF4271 plasma</item></item></item><item><item key="GSM873770"><item key="PROTOCOL">stimulated with CF4297 plasma</item></item></item><item><item key="GSM87377"><item key="PROTOCOL">stimulated with CF4304 plasma</item></item></item><item><item key="GSM873772"><item key="PROTOCOL">stimulated with CF4305 plasma</item></item></item><item><item key="GSM873773"><item key="PROTOCOL">stimulated with CF4285 plasma</item></item></item><item><item key="GSM873774"><item key="PROTOCOL">stimulated with HC1271 plasma</item></item></item><item><item key="GSM873775"><item key="PROTOCOL">stimulated with HC1365 plasma</item></item></item><item><item key="GSM873776"><item key="PROTOCOL">stimulated with HC1301 plasma</item></item></item><item><item key="GSM873777"><item key="PROTOCOL">stimulated with HC1249 plasma</item></item></item><item><item key="GSM873778"><item key="PROTOCOL">stimulated with HC1265 plasma</item></item></item><item><item key="GSM873779"><item key="PROTOCOL">stimulated with HC2300 plasma</item></item></item><item><item key="GSM873780"><item key="PROTOCOL">stimulated with HC1259 plasma</item></item></item><item><item key="GSM87378"><item key="PROTOCOL">stimulated with HC1369 plasma</item></item></item><item><item key="GSM873782"><item key="PROTOCOL">stimulated with HC381 plasma</item></item></item><item><item key="GSM873783"><item key="PROTOCOL">stimulated with HC1534 plasma</item></item></item><item><item key="GSM873784"><item key="PROTOCOL">stimulated with HC1730 plasma</item></item></item><item><item key="GSM873785"><item key="PROTOCOL">stimulated with HCy217 plasma</item></item></item><item><item key="GSM873786"><item key="PROTOCOL">stimulated with HCy226 plasma</item></item></item><item><item key="GSM873787"><item key="PROTOCOL">stimulated with HCy252 plasma</item></item></item><item><item key="GSM873788"><item key="PROTOCOL">stimulated with HCy2301 plasma</item></item></item><item><item key="GSM873789"><item key="PROTOCOL">stimulated with HCy294 plasma</item></item></item><item><item key="GSM873790"><item key="PROTOCOL">stimulated with HCy295 plasma</item></item></item><item><item key="GSM87379"><item key="PROTOCOL">stimulated with HCy385 plasma</item></item></item><item><item key="GSM873792"><item key="PROTOCOL">stimulated with HCy390 plasma</item></item></item><item><item key="GSM873793"><item key="PROTOCOL">stimulated with HCy393 plasma</item></item></item><item><item key="GSM873794"><item key="PROTOCOL">stimulated with HCy1006 plasma</item></item></item><item><item key="GSM873795"><item key="PROTOCOL">stimulated with HCy233 plasma</item></item></item><item><item key="GSM873796"><item key="PROTOCOL">stimulated with HCy284 plasma</item></item></item><item><item key="GSM873797"><item key="PROTOCOL">stimulated with HCy1837 plasma</item></item></item></item><item key="id">4415</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-35711</item><item key="summary_wrapped">The complex milieu of inflammatory mediators associated with many diseases is often too dilute to directly measure in the periphery,...</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">1</item><item key="sample_count">49</item><item key="tags"><item>cystic fibrosis</item><item>peripheral</item><item>tract</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">transcriptional-signatures-as-a-disease-specific-a</item><item key="geo_id_plat">E-GEOD-35711_A-AFFY-44</item><item key="name">Transcriptional Signatures as a Disease-Specific and Predictive Inflammatory Biomarker for Type 1 Diabetes [CF_S1S3_5Auto_20CF_10HC]</item><item key="created">Sep.19, 2014</item><item key="summary">The complex milieu of inflammatory mediators associated with many diseases is often too dilute to directly measure in the periphery, necessitating development of more sensitive measurements suitable for mechanistic studies, earlier diagnosis, guiding selection of therapy, and monitoring interventions.  Previously, we determined that plasma of recent-onset (RO) Type 1 diabetes (T1D) patients induce a proinflammatory transcriptional signature in fresh peripheral blood mononuclear cells (PBMC) relative to that of unrelated healthy controls (HC).  Here, using an optimized cryopreserved PBMC-based protocol, we compared the signature found between unrelated healthy controls and non-diabetic cystic fibrosis patients possessing Pseudomonas aeruginosa pulmonary tract infection. UPN727 cells were stimulated with autologous plasma (n=5), unrelated healthy control plasma (n=24), or plasma from patients with cystic fibrosis possessing Psuedomonas aeruginosa pulmonary tract infection (n=20). Gene expression analysis was perfromed in order to evaluate the transcriptional signature associated with cystic fibrosis.</item><item key="geo_gse_id">E-GEOD-35711</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-35711/samples/</item></data></biogps>
