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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">human</item><item key="factors"><item><item key="GSM866168"><item key="AGE (Y)">55</item><item key="GENDER">male</item><item key="PATHOLOGY">Healthy donor</item><item key="TREATMENT">Untreated</item><item key="GROWTH PROTOCOL">alphaMEM+10%FBS+FGF2(1ng/mL)</item></item></item><item><item key="GSM866169"><item key="AGE (Y)">53</item><item key="GENDER">male</item><item key="PATHOLOGY">Healthy donor</item><item key="TREATMENT">Untreated</item><item key="GROWTH PROTOCOL">alphaMEM+10%FBS+FGF2(1ng/mL)</item></item></item><item><item key="GSM866170"><item key="AGE (Y)">30</item><item key="GENDER">male</item><item key="PATHOLOGY">Healthy donor</item><item key="TREATMENT">Untreated</item><item key="GROWTH PROTOCOL">alphaMEM+10%FBS+FGF2(1ng/mL)</item></item></item><item><item key="GSM86617"><item key="AGE (Y)">68</item><item key="GENDER">female</item><item key="PATHOLOGY">Healthy donor</item><item key="TREATMENT">Untreated</item><item key="GROWTH PROTOCOL">alphaMEM+10%FBS+FGF2(1ng/mL)</item></item></item><item><item key="GSM866169"><item key="AGE (Y)">53</item><item key="GENDER">male</item><item key="PATHOLOGY">Healthy donor</item><item key="TREATMENT">Untreated</item><item key="GROWTH PROTOCOL">alphaMEM+10%FBS+FGF2(1ng/mL)</item></item></item><item><item key="GSM866173"><item key="AGE (Y)">78</item><item key="GENDER">female</item><item key="PATHOLOGY">Healthy donor</item><item key="TREATMENT">Untreated</item><item key="GROWTH PROTOCOL">alphaMEM+10%FBS+FGF2(1ng/mL)</item></item></item><item><item key="GSM866174"><item key="AGE (Y)">68</item><item key="GENDER">male</item><item key="PATHOLOGY">Follicular Lymphoma patient</item><item key="TREATMENT">Untreated</item><item key="GROWTH PROTOCOL">alphaMEM+10%FBS+FGF2(1ng/mL)</item></item></item><item><item key="GSM866175"><item key="AGE (Y)">55</item><item key="GENDER">male</item><item key="PATHOLOGY">Follicular Lymphoma patient</item><item key="TREATMENT">Untreated</item><item key="GROWTH PROTOCOL">alphaMEM+10%FBS+FGF2(1ng/mL)</item></item></item><item><item key="GSM866176"><item key="AGE (Y)">76</item><item key="GENDER">male</item><item key="PATHOLOGY">Follicular Lymphoma patient</item><item key="TREATMENT">Untreated</item><item key="GROWTH PROTOCOL">alphaMEM+10%FBS+FGF2(1ng/mL)</item></item></item><item><item key="GSM866177"><item key="AGE (Y)">53</item><item key="GENDER">female</item><item key="PATHOLOGY">Follicular Lymphoma patient</item><item key="TREATMENT">Untreated</item><item key="GROWTH PROTOCOL">alphaMEM+10%FBS+FGF2(1ng/mL)</item></item></item><item><item key="GSM866178"><item key="AGE (Y)">73</item><item key="GENDER">male</item><item key="PATHOLOGY">Follicular Lymphoma patient</item><item key="TREATMENT">Untreated</item><item key="GROWTH PROTOCOL">alphaMEM+10%FBS+FGF2(1ng/mL)</item></item></item><item><item key="GSM866179"><item key="AGE (Y)">61</item><item key="GENDER">male</item><item key="PATHOLOGY">Follicular Lymphoma patient</item><item key="TREATMENT">Untreated</item><item key="GROWTH PROTOCOL">alphaMEM+10%FBS+FGF2(1ng/mL)</item></item></item><item><item key="GSM866180"><item key="AGE (Y)">47</item><item key="GENDER">male</item><item key="PATHOLOGY">Follicular Lymphoma patient</item><item key="TREATMENT">Untreated</item><item key="GROWTH PROTOCOL">alphaMEM+10%FBS+FGF2(1ng/mL)</item></item></item><item><item key="GSM86618"><item key="AGE (Y)">56</item><item key="GENDER">male</item><item key="PATHOLOGY">Follicular Lymphoma patient</item><item key="TREATMENT">Untreated</item><item key="GROWTH PROTOCOL">alphaMEM+10%FBS+FGF2(1ng/mL)</item></item></item><item><item key="GSM866182"><item key="AGE (Y)">42</item><item key="GENDER">male</item><item key="PATHOLOGY">Follicular Lymphoma patient</item><item key="TREATMENT">Untreated</item><item key="GROWTH PROTOCOL">alphaMEM+10%FBS+FGF2(1ng/mL)</item></item></item><item><item key="GSM866183"><item key="AGE (Y)">66</item><item key="GENDER">female</item><item key="PATHOLOGY">Follicular Lymphoma patient</item><item key="TREATMENT">Untreated</item><item key="GROWTH PROTOCOL">alphaMEM+10%FBS+FGF2(1ng/mL)</item></item></item><item><item key="GSM866168"><item key="AGE (Y)">55</item><item key="GENDER">male</item><item key="PATHOLOGY">Healthy donor</item><item key="TREATMENT">Untreated</item><item key="GROWTH PROTOCOL">alphaMEM+10%FBS+FGF2(1ng/mL)</item></item></item><item><item key="GSM866169"><item key="AGE (Y)">53</item><item key="GENDER">male</item><item key="PATHOLOGY">Healthy donor</item><item key="TREATMENT">Untreated</item><item key="GROWTH PROTOCOL">alphaMEM+10%FBS+FGF2(1ng/mL)</item></item></item><item><item key="GSM866170"><item key="AGE (Y)">30</item><item key="GENDER">male</item><item key="PATHOLOGY">Healthy donor</item><item key="TREATMENT">Untreated</item><item key="GROWTH PROTOCOL">alphaMEM+10%FBS+FGF2(1ng/mL)</item></item></item><item><item key="GSM86617"><item key="AGE (Y)">68</item><item key="GENDER">female</item><item key="PATHOLOGY">Healthy donor</item><item key="TREATMENT">Untreated</item><item key="GROWTH PROTOCOL">alphaMEM+10%FBS+FGF2(1ng/mL)</item></item></item><item><item key="GSM866169"><item key="AGE (Y)">53</item><item key="GENDER">male</item><item key="PATHOLOGY">Healthy donor</item><item key="TREATMENT">Untreated</item><item key="GROWTH PROTOCOL">alphaMEM+10%FBS+FGF2(1ng/mL)</item></item></item><item><item key="GSM866173"><item key="AGE (Y)">78</item><item key="GENDER">female</item><item key="PATHOLOGY">Healthy donor</item><item key="TREATMENT">Untreated</item><item key="GROWTH PROTOCOL">alphaMEM+10%FBS+FGF2(1ng/mL)</item></item></item><item><item key="GSM866190"><item key="AGE (Y)">55</item><item key="GENDER">male</item><item key="PATHOLOGY">Healthy donor</item><item key="TREATMENT">Stimulated by TNF+LT for 3 days</item><item key="GROWTH PROTOCOL">RPMI1640+10%FBS</item></item></item><item><item key="GSM86619"><item key="AGE (Y)">53</item><item key="GENDER">male</item><item key="PATHOLOGY">Healthy donor</item><item key="TREATMENT">Stimulated by TNF+LT for 3 days</item><item key="GROWTH PROTOCOL">RPMI1640+10%FBS</item></item></item><item><item key="GSM866192"><item key="AGE (Y)">30</item><item key="GENDER">male</item><item key="PATHOLOGY">Healthy donor</item><item key="TREATMENT">Stimulated by TNF+LT for 3 days</item><item key="GROWTH PROTOCOL">RPMI1640+10%FBS</item></item></item><item><item key="GSM866193"><item key="AGE (Y)">68</item><item key="GENDER">female</item><item key="PATHOLOGY">Healthy donor</item><item key="TREATMENT">Stimulated by TNF+LT for 3 days</item><item key="GROWTH PROTOCOL">RPMI1640+10%FBS</item></item></item><item><item key="GSM86619"><item key="AGE (Y)">53</item><item key="GENDER">male</item><item key="PATHOLOGY">Healthy donor</item><item key="TREATMENT">Stimulated by TNF+LT for 3 days</item><item key="GROWTH PROTOCOL">RPMI1640+10%FBS</item></item></item><item><item key="GSM866195"><item key="AGE (Y)">78</item><item key="GENDER">female</item><item key="PATHOLOGY">Healthy donor</item><item key="TREATMENT">Stimulated by TNF+LT for 3 days</item><item key="GROWTH PROTOCOL">RPMI1640+10%FBS</item></item></item></item><item key="id">4394</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">4</item><item key="summary_wrapped">Human bone marrow mesenchymal stromal cells (BM-MSC) could be committed toward a functional lymphoid-like stroma by a combination of...</item><item key="geo_gse_id">E-GEOD-35331</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">5</item><item key="sample_count">28</item><item key="tags"><item>bone</item><item>bone marrow</item><item>cell</item><item>lymph</item><item>lymph node</item><item>stroma</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_id_plat">E-GEOD-35331_A-AFFY-44</item><item key="slug">expression-data-from-bone-marrow-mesenchymal-strom</item><item key="geo_gds_id"/><item key="name">Expression data from Bone-Marrow Mesenchymal Stromal Cells (BM-MSC) from Follicular Lymphoma patient (FL) or Healthy Donor (HD).</item><item key="created">Sep.19, 2014</item><item key="summary">Human bone marrow mesenchymal stromal cells (BM-MSC) could be committed toward a functional lymphoid-like stroma by a combination of TNFalpha (TNF) and Lymphotoxin alpha1/beta2 (LT) (Am&#233;-Thomas et al Blood 2007). Bone marrow and lymph node stromal cells support FL malignant cell recruitment and growth in particular after comittment to a lymphoid-like differentiation in vitro. In addition, more than 70% of FL patients exhibit a bone marrow involvment at diagnosis.  We delineate using Affymetrix U133+2.0 microarrays the gene expression profile of BM-MSC obtained  from FL patients (FL-MSC) and age-matched healthy donors (HD-MSC) in order to identify a specific FL-MSC signature. In addition, we used Affymetrix microarrays to define the gene expression signature of lymphoid-like stromal cells obtained from HD-MSC by treatment with TNF/LT in vitro. This TNF/LT signature was then used to interpret the gene expression profile of FL-MSC. GEP was performed on 10 BM-MSC from FL patients and 6 from healthy donors, treated or not with TNF(10 ng/mL)/LT(100ng/mL)</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-35331</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-35331/samples/</item></data></biogps>
