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Home › Dataset Library › A gene expression database for retinal neuron subtypes

Dataset: A gene expression database for retinal neuron subtypes

The goal of this experiment was to define gene expression patterns of thirteen mouse retinal neuron subsets, labeled by expression of...

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The goal of this experiment was to define gene expression patterns of thirteen mouse retinal neuron subsets, labeled by expression of fluorescent proteins in transgenic mice. Neurons expressing xFPs were purified by flow cytometry. Thirteen different neuron subtypes were compared. Two biological replicates, originating from different litters, were collected for each cell type. RNA was extracted from sorted cells and prepared for hybridization to Affymetrix microarrays.

Species:
mouse

Samples:
26

Source:
E-GEOD-35077

PubMed:
22407321

Updated:
Dec.12, 2014

Registered:
Nov.12, 2014


Factors: (via ArrayExpress)
Sample NEURON SUBTYPE CELL TYPE STRAIN OR LINE
GSM861758 starburst amacrine Kusabira Orange+Thy1– retinal cells C57BL/6
GSM861758 starburst amacrine Kusabira Orange+Thy1– retinal cells C57BL/6
GSM861760 bistratified dendrite-retinal ganglion cells (BD-RGCs) YFP+ Thy1+ retinal cells C57BL/6
GSM861760 bistratified dendrite-retinal ganglion cells (BD-RGCs) YFP+ Thy1+ retinal cells C57BL/6
GSM861762 MP-positive amacrine CFP+VC1.1+ retinal cells mixed C57BL/6 x CD1
GSM861762 MP-positive amacrine CFP+VC1.1+ retinal cells mixed C57BL/6 x CD1
GSM861764 MP-positive bipolars CFP+VC1.1– retinal cells mixed C57BL/6 x CD1
GSM861764 MP-positive bipolars CFP+VC1.1– retinal cells mixed C57BL/6 x CD1
GSM861766 aII amacrine cells GFP+ retinal cells Swiss Webster x C57BL/6
GSM861766 aII amacrine cells GFP+ retinal cells Swiss Webster x C57BL/6
GSM861768 Cdh3 BAC retinal ganglion cell (RGC) subset GFP+ Thy1+ retinal cells Swiss Webster x C57BL/7
GSM861769 Cdh3 BAC retinal ganglion cell (RGC) subset GFP+ Thy1+ retinal cells Swiss Webster x C57BL/8
GSM861770 Isl2+ retinal ganglion cells (RGCs) bgal+ Thy1+ retinal cells C57BL/6
GSM861770 Isl2+ retinal ganglion cells (RGCs) bgal+ Thy1+ retinal cells C57BL/6
GSM861772 J glycinergic amacrine cell (AC) subset YFP+ retinal cells C57BL/6
GSM861772 J glycinergic amacrine cell (AC) subset YFP+ retinal cells C57BL/6
GSM861774 J-retinal ganglion cells (RGCs) YFP+ Thy1+ retinal cells C57BL/6
GSM861774 J-retinal ganglion cells (RGCs) YFP+ Thy1+ retinal cells C57BL/6
GSM861776 ON bipolar cells GFP+ retinal cells C57BL/6
GSM861776 ON bipolar cells GFP+ retinal cells C57BL/6
GSM861778 PaxCre GABAergic amacrine cell (AC) subset GFP+ retinal cells C57BL/6
GSM861778 PaxCre GABAergic amacrine cell (AC) subset GFP+ retinal cells C57BL/6
GSM861780 W3 retinal ganglion cells (RGCs) YFP+ Thy1+ retinal cells C57BL/6
GSM861780 W3 retinal ganglion cells (RGCs) YFP+ Thy1+ retinal cells C57BL/6
GSM861782 W7 retinal ganglion cells (RGCs) YFP+ Thy1+ retinal cells C57BL/6
GSM861782 W7 retinal ganglion cells (RGCs) YFP+ Thy1+ retinal cells C57BL/6

Tags

  • cell
  • neuron

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