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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="species">mouse</item><item key="factors"><item><item key="GSM861215"><item key="DISEASE STAGE">not specified</item><item key="TIME OF TAMOXIFEN TREATMENT">7 months of tamoxifen treatment in vivo</item><item key="ORGANISM PART">bone marrow</item><item key="CELLULAR STATE">high proliferation state with low DDR signaling</item></item></item><item><item key="GSM861215"><item key="DISEASE STAGE">not specified</item><item key="TIME OF TAMOXIFEN TREATMENT">7 months of tamoxifen treatment in vivo</item><item key="ORGANISM PART">bone marrow</item><item key="CELLULAR STATE">high proliferation state with low DDR signaling</item></item></item><item><item key="GSM861215"><item key="DISEASE STAGE">not specified</item><item key="TIME OF TAMOXIFEN TREATMENT">7 months of tamoxifen treatment in vivo</item><item key="ORGANISM PART">bone marrow</item><item key="CELLULAR STATE">high proliferation state with low DDR signaling</item></item></item><item><item key="GSM861215"><item key="DISEASE STAGE">not specified</item><item key="TIME OF TAMOXIFEN TREATMENT">7 months of tamoxifen treatment in vivo</item><item key="ORGANISM PART">bone marrow</item><item key="CELLULAR STATE">high proliferation state with low DDR signaling</item></item></item><item><item key="GSM861219"><item key="DISEASE STAGE">not specified</item><item key="TIME OF TAMOXIFEN TREATMENT">from 7 to 8 months of tamoxifen treatment in vivo</item><item key="ORGANISM PART">bone marrow</item><item key="CELLULAR STATE">the transition period of lower proliferation and high DDR activity</item></item></item><item><item key="GSM861219"><item key="DISEASE STAGE">not specified</item><item key="TIME OF TAMOXIFEN TREATMENT">from 7 to 8 months of tamoxifen treatment in vivo</item><item key="ORGANISM PART">bone marrow</item><item key="CELLULAR STATE">the transition period of lower proliferation and high DDR activity</item></item></item><item><item key="GSM861219"><item key="DISEASE STAGE">not specified</item><item key="TIME OF TAMOXIFEN TREATMENT">from 7 to 8 months of tamoxifen treatment in vivo</item><item key="ORGANISM PART">bone marrow</item><item key="CELLULAR STATE">the transition period of lower proliferation and high DDR activity</item></item></item><item><item key="GSM861219"><item key="DISEASE STAGE">not specified</item><item key="TIME OF TAMOXIFEN TREATMENT">from 7 to 8 months of tamoxifen treatment in vivo</item><item key="ORGANISM PART">bone marrow</item><item key="CELLULAR STATE">the transition period of lower proliferation and high DDR activity</item></item></item><item><item key="GSM861223"><item key="DISEASE STAGE">not specified</item><item key="TIME OF TAMOXIFEN TREATMENT">8 months of tamoxifen treatment in vivo</item><item key="ORGANISM PART">bone marrow</item><item key="CELLULAR STATE">senescence</item></item></item><item><item key="GSM861223"><item key="DISEASE STAGE">not specified</item><item key="TIME OF TAMOXIFEN TREATMENT">8 months of tamoxifen treatment in vivo</item><item key="ORGANISM PART">bone marrow</item><item key="CELLULAR STATE">senescence</item></item></item><item><item key="GSM861223"><item key="DISEASE STAGE">not specified</item><item key="TIME OF TAMOXIFEN TREATMENT">8 months of tamoxifen treatment in vivo</item><item key="ORGANISM PART">bone marrow</item><item key="CELLULAR STATE">senescence</item></item></item><item><item key="GSM861226"><item key="DISEASE STAGE">not specified</item><item key="TIME OF TAMOXIFEN TREATMENT">8 months of tamoxifen treatment in vivo</item><item key="ORGANISM PART">bone marrow</item><item key="CELLULAR STATE">not specified</item></item></item><item><item key="GSM861227"><item key="DISEASE STAGE">not specified</item><item key="TIME OF TAMOXIFEN TREATMENT">7 months of tamoxifen treatment in vivo</item><item key="ORGANISM PART">bone marrow</item><item key="CELLULAR STATE">not specified</item></item></item><item><item key="GSM861227"><item key="DISEASE STAGE">not specified</item><item key="TIME OF TAMOXIFEN TREATMENT">7 months of tamoxifen treatment in vivo</item><item key="ORGANISM PART">bone marrow</item><item key="CELLULAR STATE">not specified</item></item></item><item><item key="GSM861227"><item key="DISEASE STAGE">not specified</item><item key="TIME OF TAMOXIFEN TREATMENT">7 months of tamoxifen treatment in vivo</item><item key="ORGANISM PART">bone marrow</item><item key="CELLULAR STATE">not specified</item></item></item><item><item key="GSM861230"><item key="DISEASE STAGE">early - induced proliferation and DDR</item><item key="TIME OF TAMOXIFEN TREATMENT">7 months of tamoxifen treatment in vivo</item><item key="ORGANISM PART">spleen</item><item key="CELLULAR STATE">not specified</item></item></item><item><item key="GSM861230"><item key="DISEASE STAGE">early - induced proliferation and DDR</item><item key="TIME OF TAMOXIFEN TREATMENT">7 months of tamoxifen treatment in vivo</item><item key="ORGANISM PART">spleen</item><item key="CELLULAR STATE">not specified</item></item></item><item><item key="GSM861230"><item key="DISEASE STAGE">early - induced proliferation and DDR</item><item key="TIME OF TAMOXIFEN TREATMENT">7 months of tamoxifen treatment in vivo</item><item key="ORGANISM PART">spleen</item><item key="CELLULAR STATE">not specified</item></item></item><item><item key="GSM861233"><item key="DISEASE STAGE">progression - partial senescence and DDR is maintained</item><item key="TIME OF TAMOXIFEN TREATMENT">10 months of tamoxifen treatment in vivo</item><item key="ORGANISM PART">spleen</item><item key="CELLULAR STATE">not specified</item></item></item><item><item key="GSM861233"><item key="DISEASE STAGE">progression - partial senescence and DDR is maintained</item><item key="TIME OF TAMOXIFEN TREATMENT">10 months of tamoxifen treatment in vivo</item><item key="ORGANISM PART">spleen</item><item key="CELLULAR STATE">not specified</item></item></item><item><item key="GSM861235"><item key="DISEASE STAGE">progression - partial senescence and DDR is maintained</item><item key="TIME OF TAMOXIFEN TREATMENT">9 months of tamoxifen treatment in vivo</item><item key="ORGANISM PART">spleen</item><item key="CELLULAR STATE">not specified</item></item></item><item><item key="GSM861236"><item key="DISEASE STAGE">terminal stage - proliferation, low or absent DDR and no senescence</item><item key="TIME OF TAMOXIFEN TREATMENT">21 months of tamoxifen treatment in vivo</item><item key="ORGANISM PART">spleen</item><item key="CELLULAR STATE">not specified</item></item></item><item><item key="GSM861237"><item key="DISEASE STAGE">terminal stage - proliferation, low or absent DDR and no senescence</item><item key="TIME OF TAMOXIFEN TREATMENT">23 months of tamoxifen treatment in vivo</item><item key="ORGANISM PART">spleen</item><item key="CELLULAR STATE">not specified</item></item></item><item><item key="GSM861238"><item key="DISEASE STAGE">terminal stage - proliferation, low or absent DDR and no senescence</item><item key="TIME OF TAMOXIFEN TREATMENT">19 months of tamoxifen treatment in vivo</item><item key="ORGANISM PART">spleen</item><item key="CELLULAR STATE">not specified</item></item></item><item><item key="GSM861239"><item key="DISEASE STAGE">not specified</item><item key="TIME OF TAMOXIFEN TREATMENT">24 months of tamoxifen treatment in vivo</item><item key="ORGANISM PART">spleen</item><item key="CELLULAR STATE">not specified</item></item></item><item><item key="GSM861240"><item key="DISEASE STAGE">not specified</item><item key="TIME OF TAMOXIFEN TREATMENT">8 months of tamoxifen treatment in vivo</item><item key="ORGANISM PART">spleen</item><item key="CELLULAR STATE">not specified</item></item></item><item><item key="GSM86124"><item key="DISEASE STAGE">not specified</item><item key="TIME OF TAMOXIFEN TREATMENT">9 months of tamoxifen treatment in vivo</item><item key="ORGANISM PART">spleen</item><item key="CELLULAR STATE">not specified</item></item></item><item><item key="GSM861242"><item key="DISEASE STAGE">not specified</item><item key="TIME OF TAMOXIFEN TREATMENT">11 months of tamoxifen treatment in vivo</item><item key="ORGANISM PART">spleen</item><item key="CELLULAR STATE">not specified</item></item></item><item><item key="GSM861242"><item key="DISEASE STAGE">not specified</item><item key="TIME OF TAMOXIFEN TREATMENT">11 months of tamoxifen treatment in vivo</item><item key="ORGANISM PART">spleen</item><item key="CELLULAR STATE">not specified</item></item></item></item><item key="id">8601</item><item key="pop_total">0</item><item key="platform">8</item><item key="summary_wrapped">Activation of the MLL-ENL-ERtm oncogene initiates aberrant proliferation of myeloid progenitors. Here, we show induction of a fail-safe...</item><item key="pubmed_id">22516260</item><item key="geo_gse_id">E-GEOD-35038</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">4</item><item key="sample_count">29</item><item key="tags"><item>acute leukemia</item><item>bone</item><item>bone marrow</item><item>cancer</item><item>cell</item><item>disease</item><item>estrogen</item><item>leukemia</item><item>myeloproliferative disease</item><item>protein</item><item>spleen</item><item>stem cell</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">dna-damage-response-and-inflammatory-signaling-lim</item><item key="geo_id_plat">E-GEOD-35038_A-AFFY-36</item><item key="name">DNA Damage Response and Inflammatory Signaling Limit the MLL-ENL-induced Leukemogenesis in vivo</item><item key="created">Nov.24, 2014</item><item key="summary">Activation of the MLL-ENL-ERtm oncogene initiates aberrant proliferation of myeloid progenitors. Here, we show induction of a fail-safe mechanism mediated by the DNA damage response (DDR) machinery that results in activation of the ATR/ATM-Chk1/Chk2-p53/p21 checkpoint and cellular senescence at early stages of cellular transformation caused by a regulatable MLL-ENL-ERtm in mice. Furthermore, we identified the transcription program underlying this intrinsic anti-cancer barrier, and DDR-induced inflammatory regulators that fine-tune the signaling towards senescence, thereby modulating the fate of MLL-ENL-immortalized cells in a tissue-environment-dependent manner. Our results indicate that DDR is a rate-limiting event for acquisition of stem cell-like properties in MLL-ENL-ERtm-mediated transformation, as experimental inhibition of the barrier accelerated the transition to immature cell states and acute leukemia development. We created a mouse model wherein the protein function of the MLL-ENL oncogene depends on tamoxifen due to fusion with the mutated estrogen-binding domain of the estrogen receptor (ERtm). After 7 months of tamoxifen administration, the MLL-ENL-ERtm mice developed a myeloproliferative disease, which progressed into the terminal stage after a long period (mean survival: 592 &#177; 112 days) of continuous tamoxifen provision. We have profiled gene expression at three time-points of tamoxifen treatment corresponding to three distinct cellular states of the MLL-ENL-ERtm-induced myeloproliferation in the bone marrow: 1. 7 months - high proliferation state with low DDR signaling (4 biological replicates), 2. 7-8 months - the transition period of lower proliferation and high DDR activity (4 biogical replicates) and 3. 8 months - the senescence (3 biological replicates). Time-matched tamoxifen-treated wild-type bone marrow analysed in 4 biological replicates. We have profiled gene expression in three disease stages in the spleen: 1. 7 months - early stage - induced proliferation and DDR (3 biological replicates), 2. 9-10 months - progression - partial senescence and DDR is maintained (3 biological replicates) and 3. 16-23 months - terminal stage - proliferation, low or absent DDR and no senescence (3 biological replicates). Time-matched tamoxifen-treated and age-matched wild-type spleens analysed in 5 biological replicates.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-35038</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-35038/samples/</item></data></biogps>
