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Home › Dataset Library › Transcription profiling by array of BEAS 2B cells treated with N-hydroxylated PhIP

Dataset: Transcription profiling by array of BEAS 2B cells treated with N-hydroxylated PhIP

The estimation of acceptable exposure levels for genotoxicants is accomplished by defining thresholds from apical endpoints, or by...

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The estimation of acceptable exposure levels for genotoxicants is accomplished by defining thresholds from apical endpoints, or by modeling points of departure from data that are acquired from high dose experiments, followed by linear extrapolation of the response through zero. We recently proposed that low dose exposure-induced transcriptional changes that can be linked to mechanisms of pathogenesis could provide a more sensitive alternative for defining thresholds for biological responses. In the present study, we used gene expression profiling data to determine an empirical transcriptional dose response threshold for the food and tobacco smoke borne carcinogen, 2-amino-1-methyl-6-phenylimidazo[4,5]pyridine (PhIP) in human BEAS-2B bronchial epithelial cells exposed to concentrations of N-hydroxylated PhIP ranging from 1 x 10-6 to 5 x 10-10 M. The goal was to determine transcriptional dose response threshold (NOTEL) of human BEAS-2B bronchial epithelial cells exposed to the food and tobacco smoke borne carcinogen, 2-hydroxy-mino-1-methyl-6-phenylimidazo[4,5]pyridine (N-OH-PhIP). BEAS-2B cells at ~ 70% confluence were treated with doses of N-OH-PhIP that varied over five orders or magnitude. Triplicate cell cultures were exposed to either DMS (control) or nine different doses of N-OH-PhIP at concentrations ranging from 1 x 10-6 to 5 x 10-10 M.

Species:
human

Samples:
29

Source:
E-GEOD-34635

Updated:
Dec.12, 2014

Registered:
Sep.17, 2014


Factors: (via ArrayExpress)
Sample compound dose
GSM852236 DMSO
GSM852236 DMSO
GSM852236 DMSO
GSM852239 N-hydroxylated PhIP 500
GSM852239 N-hydroxylated PhIP 500
GSM852239 N-hydroxylated PhIP 500
GSM852242 N-hydroxylated PhIP 1000
GSM852242 N-hydroxylated PhIP 1000
GSM852242 N-hydroxylated PhIP 1000
GSM852245 N-hydroxylated PhIP 100
GSM852245 N-hydroxylated PhIP 100
GSM852245 N-hydroxylated PhIP 100
GSM852248 N-hydroxylated PhIP 50
GSM852248 N-hydroxylated PhIP 50
GSM852248 N-hydroxylated PhIP 50
GSM85225 N-hydroxylated PhIP 10
GSM85225 N-hydroxylated PhIP 10
GSM85225 N-hydroxylated PhIP 10
GSM852254 N-hydroxylated PhIP 5
GSM852254 N-hydroxylated PhIP 5
GSM852254 N-hydroxylated PhIP 5
GSM852257 N-hydroxylated PhIP 1
GSM852257 N-hydroxylated PhIP 1
GSM852257 N-hydroxylated PhIP 1
GSM852260 N-hydroxylated PhIP 0.5
GSM852260 N-hydroxylated PhIP 0.5
GSM852262 N-hydroxylated PhIP 0.1
GSM852262 N-hydroxylated PhIP 0.1
GSM852262 N-hydroxylated PhIP 0.1

Tags

  • apical
  • cell

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