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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">mouse</item><item key="factors"><item><item key="GSM851629"><item key="TREATMENT">ethanol (EtOH)</item></item></item><item><item key="GSM851630"><item key="TREATMENT">4-hydroxytamoxifen (4OHT)</item></item></item><item><item key="GSM851629"><item key="TREATMENT">ethanol (EtOH)</item></item></item><item><item key="GSM851630"><item key="TREATMENT">4-hydroxytamoxifen (4OHT)</item></item></item></item><item key="id">8277</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">7</item><item key="summary_wrapped">We performed microarray analysis to examine the differential gene expression profiles between Prdm1 (Blimp-1)-deleted and control...</item><item key="geo_gse_id">E-GEOD-34586</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">1</item><item key="sample_count">4</item><item key="tags"/><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">comparison-of-the-transcripts-in-control-and-blimp</item><item key="geo_id_plat">E-GEOD-34586_A-AFFY-23</item><item key="name">Comparison of the transcripts in control and Blimp-1-deficient keratinocytes</item><item key="created">Nov.23, 2014</item><item key="summary">We performed microarray analysis to examine the differential gene expression profiles between Prdm1 (Blimp-1)-deleted and control keratinocytes. Keratinocytes isolated from Prdm1-floxed K5-CreER positive (CKO) mice were cultured in the presence of 4OHT to induce deletion of the Prdm1 allele in vitro. Prdm1-floxed K5-CreER positive (CKO) keratinocytes treated with the ethanol solvent control (EtOH) or Prdm1-floxed K5-CreER negative (control) keratinocytes treated with 4OHT or EtOH served as controls. Microarray analyses revealed that there were 93 genes up-regulated and 109 genes down-regulated by more than 2-fold in the CKO + 4OHT group in comparison with the CKO + EtOH, Ctrl + 4OHT or Ctrl + EtOH groups. Several corneocytes-related genes, including Rptn, Lce1f, Krt1 and Lce1d, are significantly down-regulated and several cytokines/chemokines, including Cxcl1, Cxcl2, Cxcl5 and Il24, are significantly up-regulated upon the deletion of Prdm1 in vitro. We analyzed the transcription profiles in control and Blimp-1-deficient keratinocytes using the GeneChip&#174; Mouse Expression Array 430A.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-34586</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-34586/samples/</item></data></biogps>
