BioGPS
  • Home
  • Help
  • Plugins
  • Datasets
  • Sign Up
  • Login
Examples: Gene Symbol(s), Gene Ontology, Splicing plugins, Melanoma datasets
advanced
Home › Dataset Library › Expression data from peripheral blood lymphocytes of major depression, subsyndromal symptomatic depression, and healthy controls

Dataset: Expression data from peripheral blood lymphocytes of major depression, subsyndromal symptomatic depression, and healthy controls

Several studies have suggested that SSD is a transitory phenomena in the depression spectrum and is thus considered a subtype of...

Registered by ArrayExpress Uploader
View Dataset

Several studies have suggested that SSD is a transitory phenomena in the depression spectrum and is thus considered a subtype of depression. However, the pathophysioloy of depression remain largely obscure and studies on SSD are limited. The present study compared the expression profile and made the classification with the leukocytes by using whole-genome cRNA microarrays among drug-free first-episode subjects with SSD, MDD, and healthy controls. We used microarrays to detail the global programme of gene expression to develop blood-based gene expression profiles models for classification of subsyndromal symptomatic depression and major depressive disorder The present study compared the expression profile and made the classification with the leukocytes by using whole-genome cRNA microarrays among drug-free first-episode subjects with SSD, MDD, and matched controls (8 subjects in each group). Support vector machines (SVMs) were utilized for training and testing on candidate signature expression profiles from signature selection step.

Species:
human

Samples:
37

Source:
E-GEOD-32280

Updated:
Dec.12, 2014

Registered:
Sep.16, 2014


Factors: (via ArrayExpress)
Sample DISEASE STATUS TREATMENT
GSM799722 MDD patient before treatment
GSM799722 MDD patient before treatment
GSM799722 MDD patient before treatment
GSM799722 MDD patient before treatment
GSM799722 MDD patient before treatment
GSM799727 healthy control not specified
GSM799727 healthy control not specified
GSM799727 healthy control not specified
GSM799727 healthy control not specified
GSM799727 healthy control not specified
GSM799727 healthy control not specified
GSM799727 healthy control not specified
GSM799727 healthy control not specified
GSM799735 SSD patient before treatment
GSM799735 SSD patient before treatment
GSM799737 SSD patient after treatment with Venlafaxine
GSM799722 MDD patient before treatment
GSM799739 MDD patient after treatment with Venlafaxine
GSM799722 MDD patient before treatment
GSM799739 MDD patient after treatment with Venlafaxine
GSM799735 SSD patient before treatment
GSM799722 MDD patient before treatment
GSM799739 MDD patient after treatment with Venlafaxine
GSM799739 MDD patient after treatment with Venlafaxine
GSM799735 SSD patient before treatment
GSM799737 SSD patient after treatment with Venlafaxine
GSM799735 SSD patient before treatment
GSM799737 SSD patient after treatment with Venlafaxine
GSM799735 SSD patient before treatment
GSM799737 SSD patient after treatment with Venlafaxine
GSM799735 SSD patient before treatment
GSM799739 MDD patient after treatment with Venlafaxine
GSM799735 SSD patient before treatment
GSM799737 SSD patient after treatment with Venlafaxine
GSM799739 MDD patient after treatment with Venlafaxine
GSM799739 MDD patient after treatment with Venlafaxine
GSM799739 MDD patient after treatment with Venlafaxine

Tags

  • genome
  • major depressive disorder

Other Formats

JSON    XML
  • About
  • Blog
  • Help
  • FAQ
  • Downloads
  • API
  • iPhone App
  • Email updates
© 2025 The Scripps Research Institute. All rights reserved. (ver 94eefe6 )
  • Terms of Use