<?xml version="1.0" encoding="ASCII"?>
<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="species">human</item><item key="factors"><item><item key="GSM799522"><item key="METASTASIS">normal</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">not specified</item></item></item><item><item key="GSM799522"><item key="METASTASIS">normal</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">not specified</item></item></item><item><item key="GSM799522"><item key="METASTASIS">normal</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">not specified</item></item></item><item><item key="GSM799522"><item key="METASTASIS">normal</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">not specified</item></item></item><item><item key="GSM799518"><item key="METASTASIS">bone metastases (CRPC)</item><item key="TMPRSS2-ERG">positive</item><item key="ANDROGEN DEPRIVATION">yes</item></item></item><item><item key="GSM799517"><item key="METASTASIS">bone metastases (CRPC)</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">yes</item></item></item><item><item key="GSM799518"><item key="METASTASIS">bone metastases (CRPC)</item><item key="TMPRSS2-ERG">positive</item><item key="ANDROGEN DEPRIVATION">yes</item></item></item><item><item key="GSM799517"><item key="METASTASIS">bone metastases (CRPC)</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">yes</item></item></item><item><item key="GSM799518"><item key="METASTASIS">bone metastases (CRPC)</item><item key="TMPRSS2-ERG">positive</item><item key="ANDROGEN DEPRIVATION">yes</item></item></item><item><item key="GSM799517"><item key="METASTASIS">bone metastases (CRPC)</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">yes</item></item></item><item><item key="GSM799517"><item key="METASTASIS">bone metastases (CRPC)</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">yes</item></item></item><item><item key="GSM799517"><item key="METASTASIS">bone metastases (CRPC)</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">yes</item></item></item><item><item key="GSM799518"><item key="METASTASIS">bone metastases (CRPC)</item><item key="TMPRSS2-ERG">positive</item><item key="ANDROGEN DEPRIVATION">yes</item></item></item><item><item key="GSM799517"><item key="METASTASIS">bone metastases (CRPC)</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">yes</item></item></item><item><item key="GSM799517"><item key="METASTASIS">bone metastases (CRPC)</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">yes</item></item></item><item><item key="GSM799518"><item key="METASTASIS">bone metastases (CRPC)</item><item key="TMPRSS2-ERG">positive</item><item key="ANDROGEN DEPRIVATION">yes</item></item></item><item><item key="GSM799517"><item key="METASTASIS">bone metastases (CRPC)</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">yes</item></item></item><item><item key="GSM799517"><item key="METASTASIS">bone metastases (CRPC)</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">yes</item></item></item><item><item key="GSM799518"><item key="METASTASIS">bone metastases (CRPC)</item><item key="TMPRSS2-ERG">positive</item><item key="ANDROGEN DEPRIVATION">yes</item></item></item><item><item key="GSM799517"><item key="METASTASIS">bone metastases (CRPC)</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">yes</item></item></item><item><item key="GSM799518"><item key="METASTASIS">bone metastases (CRPC)</item><item key="TMPRSS2-ERG">positive</item><item key="ANDROGEN DEPRIVATION">yes</item></item></item><item><item key="GSM799517"><item key="METASTASIS">bone metastases (CRPC)</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">yes</item></item></item><item><item key="GSM799518"><item key="METASTASIS">bone metastases (CRPC)</item><item key="TMPRSS2-ERG">positive</item><item key="ANDROGEN DEPRIVATION">yes</item></item></item><item><item key="GSM799517"><item key="METASTASIS">bone metastases (CRPC)</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">yes</item></item></item><item><item key="GSM799518"><item key="METASTASIS">bone metastases (CRPC)</item><item key="TMPRSS2-ERG">positive</item><item key="ANDROGEN DEPRIVATION">yes</item></item></item><item><item key="GSM799517"><item key="METASTASIS">bone metastases (CRPC)</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">yes</item></item></item><item><item key="GSM799517"><item key="METASTASIS">bone metastases (CRPC)</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">yes</item></item></item><item><item key="GSM799518"><item key="METASTASIS">bone metastases (CRPC)</item><item key="TMPRSS2-ERG">positive</item><item key="ANDROGEN DEPRIVATION">yes</item></item></item><item><item key="GSM799517"><item key="METASTASIS">bone metastases (CRPC)</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">yes</item></item></item><item><item key="GSM799517"><item key="METASTASIS">bone metastases (CRPC)</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">yes</item></item></item><item><item key="GSM799517"><item key="METASTASIS">bone metastases (CRPC)</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">yes</item></item></item><item><item key="GSM799517"><item key="METASTASIS">bone metastases (CRPC)</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">yes</item></item></item><item><item key="GSM799518"><item key="METASTASIS">bone metastases (CRPC)</item><item key="TMPRSS2-ERG">positive</item><item key="ANDROGEN DEPRIVATION">yes</item></item></item><item><item key="GSM799489"><item key="METASTASIS">localized prostate cancer</item><item key="TMPRSS2-ERG">positive</item><item key="ANDROGEN DEPRIVATION">no</item></item></item><item><item key="GSM799489"><item key="METASTASIS">localized prostate cancer</item><item key="TMPRSS2-ERG">positive</item><item key="ANDROGEN DEPRIVATION">no</item></item></item><item><item key="GSM799489"><item key="METASTASIS">localized prostate cancer</item><item key="TMPRSS2-ERG">positive</item><item key="ANDROGEN DEPRIVATION">no</item></item></item><item><item key="GSM799489"><item key="METASTASIS">localized prostate cancer</item><item key="TMPRSS2-ERG">positive</item><item key="ANDROGEN DEPRIVATION">no</item></item></item><item><item key="GSM799489"><item key="METASTASIS">localized prostate cancer</item><item key="TMPRSS2-ERG">positive</item><item key="ANDROGEN DEPRIVATION">no</item></item></item><item><item key="GSM799484"><item key="METASTASIS">localized prostate cancer</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">no</item></item></item><item><item key="GSM799484"><item key="METASTASIS">localized prostate cancer</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">no</item></item></item><item><item key="GSM799489"><item key="METASTASIS">localized prostate cancer</item><item key="TMPRSS2-ERG">positive</item><item key="ANDROGEN DEPRIVATION">no</item></item></item><item><item key="GSM799489"><item key="METASTASIS">localized prostate cancer</item><item key="TMPRSS2-ERG">positive</item><item key="ANDROGEN DEPRIVATION">no</item></item></item><item><item key="GSM799484"><item key="METASTASIS">localized prostate cancer</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">no</item></item></item><item><item key="GSM799484"><item key="METASTASIS">localized prostate cancer</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">no</item></item></item><item><item key="GSM799484"><item key="METASTASIS">localized prostate cancer</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">no</item></item></item><item><item key="GSM799484"><item key="METASTASIS">localized prostate cancer</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">no</item></item></item><item><item key="GSM799484"><item key="METASTASIS">localized prostate cancer</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">no</item></item></item><item><item key="GSM799484"><item key="METASTASIS">localized prostate cancer</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">no</item></item></item><item><item key="GSM799484"><item key="METASTASIS">localized prostate cancer</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">no</item></item></item><item><item key="GSM799489"><item key="METASTASIS">localized prostate cancer</item><item key="TMPRSS2-ERG">positive</item><item key="ANDROGEN DEPRIVATION">no</item></item></item><item><item key="GSM799489"><item key="METASTASIS">localized prostate cancer</item><item key="TMPRSS2-ERG">positive</item><item key="ANDROGEN DEPRIVATION">no</item></item></item><item><item key="GSM799489"><item key="METASTASIS">localized prostate cancer</item><item key="TMPRSS2-ERG">positive</item><item key="ANDROGEN DEPRIVATION">no</item></item></item><item><item key="GSM799489"><item key="METASTASIS">localized prostate cancer</item><item key="TMPRSS2-ERG">positive</item><item key="ANDROGEN DEPRIVATION">no</item></item></item><item><item key="GSM799489"><item key="METASTASIS">localized prostate cancer</item><item key="TMPRSS2-ERG">positive</item><item key="ANDROGEN DEPRIVATION">no</item></item></item><item><item key="GSM799484"><item key="METASTASIS">localized prostate cancer</item><item key="TMPRSS2-ERG">negative</item><item key="ANDROGEN DEPRIVATION">no</item></item></item></item><item key="id">1280</item><item key="pop_total">0</item><item key="platform">3</item><item key="summary_wrapped">We compared 22 primary Pca (hormone-dependent) versus 29 metastatic Pca (CRPC). The expression of genes related to cell cycle,...</item><item key="geo_gse_id">E-GEOD-32269</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">3</item><item key="sample_count">55</item><item key="tags"><item>androgen</item><item>bone</item><item>bone marrow</item><item>cancer</item><item>cell</item><item>hormone</item><item>lcm</item><item>pca</item><item>prostate</item><item>prostate cancer</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">expression-data-for-primary-localized-prostate-can</item><item key="geo_id_plat">E-GEOD-32269_A-AFFY-33</item><item key="name">Expression data for primary localized prostate cancer versus castration-resistant bone metastatic prostate cancer</item><item key="created">Jun.18, 2014</item><item key="summary">We compared 22 primary Pca (hormone-dependent) versus 29 metastatic Pca (CRPC). The expression of genes related to cell cycle, proliferation, DNA synthesis, and androgen metablism are significantly increased in CRPC group. The expression of AR-stimulated genes were partially reactivated. TMPRSS2-ERG fusion status was determined for the samples by PCR. The expression of ERG was highly increased in fusion positive versus negative. 120 snap-frozen CT-guided bone marrow biopsies from patients with castration-resistant prostate cancer were collected as a source of material. 29 independent biopsies containing mostly tumor were identified as CRPC group through carefully microscopical examination. 4 samples containing no tumor were identified as normal bone marrow group. Primary tumor was isolated by LCM from frozen biopsies of hormone-naive patients. 22 samples were selected as primary PCa group.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-32269</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-32269/samples/</item></data></biogps>
