Dataset: Primary Lung Cancer Specimens
This SuperSeries is composed of the following subset Series: GSE31546: UMCCC Primary Lung Cancer Specimens GSE31547: MSKCC-A Primary Lung...
This SuperSeries is composed of the following subset Series: GSE31546: UMCCC Primary Lung Cancer Specimens GSE31547: MSKCC-A Primary Lung Cancer Specimens GSE31548: MSKCC-B Primary Lung Cancer Specimens Refer to individual Series
- Species:
- human
- Samples:
- 50
- Source:
- E-GEOD-31908
- Updated:
- Dec.16, 2014
- Registered:
- Dec.16, 2014
Factors:
(via ArrayExpress)
| Sample | GRPSTAGE | MONTHS TO FIRST PROGRESSION | AGE | PATHOLOGIC N STAGE | WHO HISTOLOGIC SUBTYPE | SURGDTE/TB_DATE | MONTHS TO LAST CONTACT OR DEATH | FIRST PROGRESSION OR RELAPSE | ADJUVANT CHEMO | PT | RECDTE1 | GENDER | LAST F/U | SEX | RACE | SMOKING | PATHOLOGIC T STAGE | CT | PN | SMOKING HISTORY | MSKCC HISTOLOGY | LABORATORY BATCH | STATUS | DEATH_IND | VITAL STATUS | ADJUVANT RX | DEATHDTE | INTREC1 | TUMORSITE | RECTYPE1 | WHO GRADE | PACK YRS | INTSTAT | MONTHS TO LAST CLINICAL ASSESSMENT | HISTOLOGIC GRADE | OTHER | TIME QUIT (@ INITIAL CONSULT) | EGFR STATUS |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GSM782978 | 1A | not specified | 70 | not specified | BAC (M, NM) | 1999-01-13 | not specified | not specified | not specified | 1 | not specified | not specified | 2002-12-10 | F | WNH | Former | not specified | not specified | 0 | not specified | PBAC | not specified | NED | A | not specified | not specified | not specified | not specified | LtLungTumor | not specified | WD | 20 | 47 | not specified | not specified | not specified | >10yrs | Wild-type |
| GSM782979 | 1A | not specified | 65 | not specified | BAC, ACI | 2000-06-29 | not specified | not specified | not specified | 1 | not specified | not specified | 2003-09-10 | F | WNH | Former | not specified | not specified | 0 | not specified | BWFI | not specified | NED | A | not specified | not specified | not specified | not specified | RtLungTumor | not specified | WD | 34.5 | 39 | not specified | not specified | not specified | >10yrs | Wild-type |
| GSM782980 | 2 | not specified | 48 | not specified | PAP, BAC | 1991-09-03 | not specified | not specified | not specified | 2 | 33715 | not specified | 1993-06-03 | F | WNH | UNK | not specified | not specified | 1 | not specified | AWBF | not specified | DOD | D | not specified | not specified | 34123 | 7 | ?? Upper Lobe | ?? Pleura, ?? Hemidiaphragm | MD | UNK | 21 | not specified | not specified | Not available | not specified | Mutant |
| GSM78298 | 1B | not specified | 68 | not specified | BAC, ACI | 1999-03-09 | not specified | not specified | not specified | 2 | 37347 | not specified | 2003-03-05 | M | WNH | Former | not specified | not specified | 0 | not specified | BWFI | not specified | AWD | A | not specified | not specified | not specified | 37 | RtLungTumor | Lt. Adrenal | MD | 80 | 48 | not specified | not specified | not specified | 6-10yrs | Wild-type |
| GSM782982 | 3A | not specified | 52 | not specified | ACI, SOL | 1999-07-19 | not specified | not specified | not specified | 2 | 36594 | not specified | 2000-09-28 | F | WNH | Current | not specified | not specified | 2 | not specified | ACA | not specified | DOD | D | not specified | not specified | 36797 | 8 | LtLungTumor | Adrenal | MD, PD | 52.5 | 14 | not specified | not specified | Quit by OR | 0 | Wild-type |
| GSM782983 | 1B | not specified | 62 | not specified | BAC, ACI | 1997-05-20 | not specified | not specified | not specified | 2 | not specified | not specified | 2000-02-03 | M | WNH | Former | not specified | not specified | 0 | not specified | BWFI | not specified | NED | A | not specified | not specified | not specified | not specified | RtLungTumor | not specified | MD | 20 | 33 | not specified | not specified | not specified | 6-10yrs | Wild-type |
| GSM782984 | 1A | not specified | 50 | not specified | ACI, BAC | 2000-04-24 | not specified | not specified | not specified | 1 | not specified | not specified | 2001-07-05 | F | WNH | Current | not specified | not specified | 0 | not specified | AWBF | not specified | NED | A | not specified | not specified | not specified | not specified | RtLungTumor | not specified | MD | 45 | 15 | not specified | not specified | Quit by OR | 0 | Wild-type |
| GSM782985 | 1B | not specified | 74 | not specified | BAC,ACI | 2000-01-17 | not specified | not specified | not specified | 2 | 37734 | not specified | 2003-08-23 | M | WNH | Former | not specified | not specified | 0 | not specified | BWFI | not specified | AWD | A | not specified | not specified | not specified | 39 | RtLungTumor | Pleura-Rt. Parietal | WD | 154 | 43 | not specified | not specified | Cigar | >10yrs | Mutant |
| GSM782986 | 1B | not specified | 58 | not specified | ACI | 1998-05-18 | not specified | not specified | not specified | 2 | not specified | not specified | 1998-05-30 | F | WNH | Former | not specified | not specified | 0 | not specified | ACA | not specified | DOC | D | not specified | not specified | 35945 | not specified | LtLungTumor | not specified | PD | 45 | 0 | not specified | not specified | not specified | >10yrs | Wild-type |
| GSM782987 | 2B | not specified | 70 | not specified | ACI | 2000-02-16 | not specified | not specified | not specified | 2 | 36973 | not specified | 2001-10-22 | M | WNH | Former | not specified | not specified | 1 | not specified | ACA | not specified | DOD | D | not specified | not specified | 37186 | 13 | LtLungTumor | mediastinum | MD | 82 | 20 | not specified | not specified | Asbestos exposure | 6-10yrs | Wild-type |
| GSM782988 | 2A | not specified | 67 | not specified | BAC,ACI | 2000-02-02 | not specified | not specified | not specified | 1 | 37204 | not specified | 2002-10-12 | M | WNH | Never | not specified | not specified | 1 | not specified | BWFI | not specified | DOD | D | not specified | not specified | 37541 | 21 | RtLungTumor | pleura | MD | 0 | 32 | not specified | not specified | Cigar | not specified | Mutant |
| GSM782989 | 1B | not specified | 57 | not specified | BAC, ACI | 1996-11-25 | not specified | not specified | not specified | 2 | not specified | not specified | 2000-10-03 | F | WNH | Former | not specified | not specified | 0 | not specified | BWFI | not specified | NED | A | not specified | not specified | not specified | not specified | RtLungTumor | not specified | WD | 37 | 47 | not specified | not specified | not specified | UNK | Mutant |
| GSM782990 | 1A | not specified | 76 | not specified | BAC,ACI | 2001-07-12 | not specified | not specified | not specified | 1 | not specified | not specified | 2004-08-23 | F | WNH | Never | not specified | not specified | 0 | not specified | BWFI | not specified | NED | A | not specified | not specified | not specified | not specified | LungTumor,LtUpper | not specified | MD | 0 | 37 | not specified | not specified | not specified | not specified | Mutant |
| GSM78299 | 1A | not specified | 49 | not specified | BAC, ACI | 1996-01-16 | not specified | not specified | not specified | 1 | not specified | not specified | 2003-06-25 | F | WNH | Never | not specified | not specified | 0 | not specified | BWFI | not specified | NED | A | not specified | not specified | not specified | not specified | LtLungTumo | not specified | WD | 0 | 89 | not specified | not specified | not specified | not specified | Mutant |
| GSM782992 | 1A | not specified | 46 | not specified | ACI | 1998-12-14 | not specified | not specified | not specified | 1 | not specified | not specified | 2002-03-08 | F | WNH | Former | not specified | not specified | 0 | not specified | ACA | not specified | NED | A | not specified | not specified | not specified | not specified | RtLungTumor | not specified | MD | 80 | 39 | not specified | not specified | not specified | 1-4wks | Wild-type |
| GSM782993 | 2B | not specified | 51 | not specified | BAC,ACI | 1999-01-11 | not specified | not specified | not specified | 2 | not specified | not specified | 2003-03-01 | M | WNH | Never | not specified | not specified | 1 | not specified | BWFI | not specified | NED | A | not specified | not specified | not specified | not specified | RtLungTumor | not specified | WD | 0 | 50 | not specified | not specified | not specified | not specified | Wild-type |
| GSM782994 | 3A | not specified | 50 | not specified | ACI | 2000-06-13 | not specified | not specified | not specified | 2 | 37529 | not specified | 2003-12-27 | F | WNH | Former | not specified | not specified | 2 | not specified | ACA | not specified | DOD | A | not specified | not specified | not specified | 27 | LtLungTumor | ?? Posterior chest wall | MD | 10 | 42 | not specified | not specified | not specified | >10yrs | Mutant |
| GSM782995 | 1B | not specified | 69 | not specified | SOL | 1999-06-23 | not specified | not specified | not specified | 2 | not specified | not specified | 2004-06-23 | F | WNH | Former | not specified | not specified | 0 | not specified | ACA | not specified | NED | A | not specified | not specified | not specified | not specified | LungTumor | not specified | PD | UNK | 60 | not specified | not specified | UNK if quit by OR, Pipe | 0 | Wild-type |
| GSM782996 | 1A | not specified | 53 | not specified | BAC, ACI | 2000-04-11 | not specified | not specified | not specified | 1 | not specified | not specified | 2003-04-15 | F | WNH | Never | not specified | not specified | 0 | not specified | BWFI | not specified | NED | A | not specified | not specified | not specified | not specified | RtLungTumor | not specified | WD | 0 | 36 | not specified | not specified | 2nd hand smoke exposure | not specified | Mutant |
| GSM782997 | 2B | not specified | 53 | not specified | SOL | 2000-08-31 | not specified | not specified | not specified | 2 | 37138 | not specified | 2002-04-15 | F | WNH | Former | not specified | not specified | 1 | not specified | ACA | not specified | DOD | D | not specified | not specified | 37361 | 13 | RtLungTumor | Peripancreatic | PD | 123 | 20 | not specified | not specified | not specified | 6-12mos | Wild-type |
| GSM782998 | 1B | not specified | 61 | not specified | ACI, BAC | 2000-05-03 | not specified | not specified | not specified | 2 | 37459 | not specified | 2003-10-07 | M | WNH | Former | not specified | not specified | 0 | not specified | AWBF | not specified | NED | A | not specified | not specified | not specified | 26 | LungTumor | Lung-RLL | MD | 5 | 41 | not specified | not specified | not specified | >10yrs | Mutant |
| GSM782999 | 2B | not specified | 74 | not specified | SOL | 1999-12-15 | not specified | not specified | not specified | 2 | not specified | not specified | 2003-06-24 | F | WNH | Current | not specified | not specified | 1 | not specified | ACA | not specified | NED | A | not specified | not specified | not specified | not specified | LtLungTumor | not specified | PD | 50 | 42 | not specified | not specified | Quit by OR | 0 | Wild-type |
| GSM783000 | 3A | not specified | 48 | not specified | ACI, BAC | 1998-10-12 | not specified | not specified | not specified | 1 | 36960 | not specified | 2003-01-07 | F | WNH | Former | not specified | not specified | 2 | not specified | AWBF | not specified | DOD | D | not specified | not specified | 37628 | 29 | LtLungTumor | brain | MD | 3 | 51 | not specified | not specified | not specified | >10yrs | Mutant |
| GSM78300 | 1B | not specified | 70 | not specified | ACI | 2000-10-18 | not specified | not specified | not specified | 2 | 36978 | not specified | 2004-06-23 | F | BNH | Former | not specified | TX | 0 | not specified | ACA | not specified | NED | A | not specified | not specified | not specified | 5 | LtLungTumor | Left Suprahilar region | MD | 5 | 44 | not specified | not specified | not specified | 6-10yrs | Mutant |
| GSM783002 | 3A | not specified | 64 | not specified | ACI | 2001-06-04 | not specified | not specified | not specified | 1 | not specified | not specified | 2004-03-08 | F | WNH | Former | not specified | not specified | 2 | not specified | ACA | not specified | DOC | A | not specified | not specified | 38054 | not specified | LungTumor,LtUpper | not specified | MD | 40 | not specified | not specified | not specified | not specified | 1-6mos | Wild-type |
| GSM783003 | 1A | not specified | 51 | not specified | ACI, BAC | 1993-01-15 | not specified | not specified | not specified | 1 | 33557 | not specified | 1993-04-21 | F | WNH | UNK | not specified | not specified | 1 | not specified | AWBF | not specified | DOD | D | not specified | not specified | 34080 | 7 | (L) Upper Lobe | Bone-rib | MD | UNK | 3 | not specified | not specified | Not available | not specified | Wild-type |
| GSM783004 | 1A | not specified | 63 | not specified | BAC, ACI | 2000-10-03 | not specified | not specified | not specified | 1 | not specified | not specified | 2004-05-10 | F | WNH | Never | not specified | not specified | 0 | not specified | BWFI | not specified | NED | A | not specified | not specified | not specified | not specified | RtLungTumor | not specified | WD | 0 | 44 | not specified | not specified | 2nd hand smoke exposure | not specified | Mutant |
| GSM783005 | 2B | not specified | 74 | not specified | ACI | 2000-04-28 | not specified | not specified | not specified | 2 | 37412 | not specified | 2004-06-10 | F | WNH | Never | not specified | T1 | 1 | not specified | ACA | not specified | AWD | A | not specified | not specified | not specified | 26 | LtLungTumor | pleura | MD | 0 | 50 | not specified | not specified | not specified | not specified | Mutant |
| GSM783006 | 2A | not specified | 79 | not specified | ACI, BAC | 1998-02-12 | not specified | not specified | not specified | 1 | 36032 | not specified | 1998-12-18 | F | WNH | Never | not specified | not specified | 1 | not specified | AWBF | not specified | DOD | D | not specified | not specified | 36147 | 6 | LungTumor | Brain ?? temporal lobe | MD | 0 | 10 | not specified | not specified | not specified | not specified | Mutant |
| GSM783007 | 3A | not specified | 69 | not specified | ACI | 1999-05-11 | not specified | not specified | not specified | 1 | not specified | not specified | 2002-03-22 | M | WNH | Never | not specified | not specified | 2 | not specified | ACA | not specified | NED | A | not specified | not specified | not specified | not specified | LungTumor | not specified | MD | 0 | 34 | not specified | not specified | not specified | not specified | Wild-type |
| GSM783008 | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | F | not specified | Never | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | Wild-type |
| GSM783009 | not specified | not specified | 65 | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | F | WNH | Former | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | Wild-type |
| GSM783010 | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | M | not specified | Current | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | Wild-type |
| GSM7830 | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | F | not specified | Former | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | Wild-type |
| GSM783012 | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | M | not specified | Former | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | Wild-type |
| GSM783013 | not specified | not specified | 52 | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | F | WNH | Current | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | Wild-type |
| GSM783014 | not specified | not specified | 62 | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | M | WNH | Former | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | Wild-type |
| GSM783015 | not specified | not specified | 74 | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | M | WNH | Former | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | Wild-type |
| GSM783012 | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | M | not specified | Former | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | Wild-type |
| GSM7830 | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | F | not specified | Former | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | Wild-type |
| GSM783008 | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | F | not specified | Never | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | Wild-type |
| GSM783012 | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | M | not specified | Former | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | Wild-type |
| GSM783020 | not specified | not specified | 76 | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | F | WNH | Never | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | Wild-type |
| GSM78302 | not specified | not specified | 49 | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | F | WNH | Never | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | Wild-type |
| GSM7830 | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | F | not specified | Former | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | Wild-type |
| GSM7830 | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | F | not specified | Former | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | Wild-type |
| GSM783024 | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | F | not specified | Current | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | Wild-type |
| GSM7830 | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | F | not specified | Former | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | Wild-type |
| GSM7830 | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | F | not specified | Former | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | Wild-type |
| GSM783027 | not specified | not specified | 74 | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | F | WNH | Never | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | not specified | Wild-type |