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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">human</item><item key="factors"><item><item key="GSM790400"><item key="CELL LINE">EJ1</item><item key="CELL TYPE">Human bladder carcinoma, fast growing tumour</item></item></item><item><item key="GSM79040"><item key="CELL LINE">NHU</item><item key="CELL TYPE">Normal human urothelial cell line, moderate growth</item></item></item><item><item key="GSM790402"><item key="CELL LINE">RT112</item><item key="CELL TYPE">Human bladder carcinoma, relatively fast growing tumour</item></item></item></item><item key="id">4222</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">4</item><item key="summary_wrapped">To gain a more depth knowledge of repressive epigenetic gene regulation in UCC, we have profiled H3K9m3 and H3K27m3 in normal and...</item><item key="geo_gse_id">E-GEOD-31864</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">2</item><item key="sample_count">3</item><item key="tags"><item>cancer</item><item>cell</item><item>cytosine</item><item>histone</item><item>line</item><item>urothelium</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">epigenome-profiling-of-repressive-histone-modifica</item><item key="geo_id_plat">E-GEOD-31864_A-AFFY-44</item><item key="name">Epigenome profiling of repressive histone modifications, DNA methylation and gene expression in normal and malignant urothelial cells</item><item key="created">Sep.16, 2014</item><item key="summary">To gain a more depth knowledge of repressive epigenetic gene regulation in UCC, we have profiled H3K9m3 and H3K27m3 in normal and malignant urothelial cells. We matched these profiles to those 5-methylcytosine and gene expression. We hypothesized that differences represent pro-carcinogenic events within the urothelium. We identified a panel of genes with cancer specific epigenetic mediated aberrant expression. Two repressive histone modifications (H3K9m3 and H3K27m3) , cytosine methylation and gene expression were compared between normal human urothelial cell line (NHU) and malignant urothelial cells (EJ and RT112).</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-31864</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-31864/samples/</item></data></biogps>
