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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">human</item><item key="factors"><item><item key="GSM788456"><item key="CELL LINE">MDA-MB231</item><item key="JMJD6 EXPRESSION">Knock-down</item></item></item><item><item key="GSM788457"><item key="CELL LINE">MDA-MB231</item><item key="JMJD6 EXPRESSION">Control (scrambled siRNA)</item></item></item><item><item key="GSM788456"><item key="CELL LINE">MDA-MB231</item><item key="JMJD6 EXPRESSION">Knock-down</item></item></item><item><item key="GSM788457"><item key="CELL LINE">MDA-MB231</item><item key="JMJD6 EXPRESSION">Control (scrambled siRNA)</item></item></item><item><item key="GSM788456"><item key="CELL LINE">MDA-MB231</item><item key="JMJD6 EXPRESSION">Knock-down</item></item></item><item><item key="GSM788457"><item key="CELL LINE">MDA-MB231</item><item key="JMJD6 EXPRESSION">Control (scrambled siRNA)</item></item></item><item><item key="GSM788456"><item key="CELL LINE">MDA-MB231</item><item key="JMJD6 EXPRESSION">Knock-down</item></item></item><item><item key="GSM788457"><item key="CELL LINE">MDA-MB231</item><item key="JMJD6 EXPRESSION">Control (scrambled siRNA)</item></item></item><item><item key="GSM788464"><item key="CELL LINE">MCF-7</item><item key="JMJD6 EXPRESSION">Knock-down</item></item></item><item><item key="GSM788465"><item key="CELL LINE">MCF-7</item><item key="JMJD6 EXPRESSION">Control (scrambled siRNA)</item></item></item><item><item key="GSM788464"><item key="CELL LINE">MCF-7</item><item key="JMJD6 EXPRESSION">Knock-down</item></item></item><item><item key="GSM788465"><item key="CELL LINE">MCF-7</item><item key="JMJD6 EXPRESSION">Control (scrambled siRNA)</item></item></item><item><item key="GSM788464"><item key="CELL LINE">MCF-7</item><item key="JMJD6 EXPRESSION">Knock-down</item></item></item><item><item key="GSM788465"><item key="CELL LINE">MCF-7</item><item key="JMJD6 EXPRESSION">Control (scrambled siRNA)</item></item></item><item><item key="GSM788464"><item key="CELL LINE">MCF-7</item><item key="JMJD6 EXPRESSION">Knock-down</item></item></item><item><item key="GSM788465"><item key="CELL LINE">MCF-7</item><item key="JMJD6 EXPRESSION">Control (scrambled siRNA)</item></item></item><item><item key="GSM788472"><item key="CELL LINE">MCF-7</item><item key="JMJD6 EXPRESSION">Over-expressed</item></item></item><item><item key="GSM788472"><item key="CELL LINE">MCF-7</item><item key="JMJD6 EXPRESSION">Over-expressed</item></item></item><item><item key="GSM788472"><item key="CELL LINE">MCF-7</item><item key="JMJD6 EXPRESSION">Over-expressed</item></item></item><item><item key="GSM788475"><item key="CELL LINE">MCF-7</item><item key="JMJD6 EXPRESSION">Control (empty vector)</item></item></item><item><item key="GSM788472"><item key="CELL LINE">MCF-7</item><item key="JMJD6 EXPRESSION">Over-expressed</item></item></item><item><item key="GSM788472"><item key="CELL LINE">MCF-7</item><item key="JMJD6 EXPRESSION">Over-expressed</item></item></item><item><item key="GSM788472"><item key="CELL LINE">MCF-7</item><item key="JMJD6 EXPRESSION">Over-expressed</item></item></item><item><item key="GSM788475"><item key="CELL LINE">MCF-7</item><item key="JMJD6 EXPRESSION">Control (empty vector)</item></item></item><item><item key="GSM788472"><item key="CELL LINE">MCF-7</item><item key="JMJD6 EXPRESSION">Over-expressed</item></item></item><item><item key="GSM788472"><item key="CELL LINE">MCF-7</item><item key="JMJD6 EXPRESSION">Over-expressed</item></item></item><item><item key="GSM788472"><item key="CELL LINE">MCF-7</item><item key="JMJD6 EXPRESSION">Over-expressed</item></item></item><item><item key="GSM788475"><item key="CELL LINE">MCF-7</item><item key="JMJD6 EXPRESSION">Control (empty vector)</item></item></item></item><item key="id">4221</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">4</item><item key="summary_wrapped">By survival analysis of breast cancer patients, JMJD6 was found to be significantly associated with poor prognosis. Over-expression and...</item><item key="geo_gse_id">E-GEOD-31782</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">2</item><item key="sample_count">28</item><item key="tags"><item>breast</item><item>breast cancer</item><item>cancer</item><item>cell</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">knock-down-and-over-expression-of-jmjd6-in-mcf-7-a</item><item key="geo_id_plat">E-GEOD-31782_A-AFFY-44</item><item key="name">Knock-down and Over-expression of JMJD6 in MCF-7 and/or MDA-MB231</item><item key="created">Sep.16, 2014</item><item key="summary">By survival analysis of breast cancer patients, JMJD6 was found to be significantly associated with poor prognosis. Over-expression and knock-down of JMJD6 in breast cancer cell lines suggested a role in proliferation. In order to study the transcriptional events that occur following JMJD6 expression changes, siRNA-mediated knock-down of JMJD6 was performed in MCF-7 and MDA-MB231 and stable over-expression of JMJD6 was performed in MCF-7. There are 2 different siRNA-mediated knock-downs of JMJD6 with 2 biological replicates in MCF-7 and MDA-MB231; 3 clones of JMJD6 over-expression with 3 biological replicates in MCF-7. The control for the knock-downs is scrambled siRNA-treated MCF-7 and MDA-MB231 and the control for JMJD6 over-expression is empty vector over-expression in MCF-7.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-31782</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-31782/samples/</item></data></biogps>
