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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">human</item><item key="factors"><item><item key="GSM788299"><item key="MEDICATION">Becotide, Ventolin</item><item key="FVC (% PREDICTED)">98</item><item key="FEV1 (% PREDICTED)">82</item><item key="GENDER">male</item><item key="BATCH">2</item><item key="AGE (YEARS)">23</item><item key="PATIENT ID">Non_severe_1</item><item key="CELL TYPE">CD4+ T-cells</item></item></item><item><item key="GSM788300"><item key="MEDICATION">flixotide</item><item key="FVC (% PREDICTED)">92</item><item key="FEV1 (% PREDICTED)">87</item><item key="GENDER">female</item><item key="BATCH">2</item><item key="AGE (YEARS)">44</item><item key="PATIENT ID">Non_severe_2</item><item key="CELL TYPE">CD4+ T-cells</item></item></item><item><item key="GSM78830"><item key="MEDICATION">Becotide, Ventolin</item><item key="FVC (% PREDICTED)">89</item><item key="FEV1 (% PREDICTED)">77</item><item key="GENDER">male</item><item key="BATCH">2</item><item key="AGE (YEARS)">35</item><item key="PATIENT ID">Non_severe_3</item><item key="CELL TYPE">CD4+ T-cells</item></item></item><item><item key="GSM788302"><item key="MEDICATION">Salbutamol</item><item key="FVC (% PREDICTED)">81</item><item key="FEV1 (% PREDICTED)">84</item><item key="GENDER">female</item><item key="BATCH">2</item><item key="AGE (YEARS)">23</item><item key="PATIENT ID">Non_severe_4</item><item key="CELL TYPE">CD4+ T-cells</item></item></item><item><item key="GSM788303"><item key="MEDICATION">None</item><item key="FVC (% PREDICTED)">76</item><item key="FEV1 (% PREDICTED)">78</item><item key="GENDER">male</item><item key="BATCH">1</item><item key="AGE (YEARS)">39</item><item key="PATIENT ID">Control_1</item><item key="CELL TYPE">CD4+ T-cells</item></item></item><item><item key="GSM788304"><item key="MEDICATION">None</item><item key="FVC (% PREDICTED)">107</item><item key="FEV1 (% PREDICTED)">103</item><item key="GENDER">female</item><item key="BATCH">1</item><item key="AGE (YEARS)">25</item><item key="PATIENT ID">Control_2</item><item key="CELL TYPE">CD4+ T-cells</item></item></item><item><item key="GSM788305"><item key="MEDICATION">None</item><item key="FVC (% PREDICTED)">115</item><item key="FEV1 (% PREDICTED)">105</item><item key="GENDER">female</item><item key="BATCH">1</item><item key="AGE (YEARS)">26</item><item key="PATIENT ID">Control_3</item><item key="CELL TYPE">CD4+ T-cells</item></item></item><item><item key="GSM788306"><item key="MEDICATION">None</item><item key="FVC (% PREDICTED)">105</item><item key="FEV1 (% PREDICTED)">92</item><item key="GENDER">male</item><item key="BATCH">1</item><item key="AGE (YEARS)">46</item><item key="PATIENT ID">Control_4</item><item key="CELL TYPE">CD4+ T-cells</item></item></item><item><item key="GSM788307"><item key="MEDICATION">None</item><item key="FVC (% PREDICTED)">77</item><item key="FEV1 (% PREDICTED)">78</item><item key="GENDER">male</item><item key="BATCH">1</item><item key="AGE (YEARS)">33</item><item key="PATIENT ID">Control_5</item><item key="CELL TYPE">CD4+ T-cells</item></item></item><item><item key="GSM788308"><item key="MEDICATION">None</item><item key="FVC (% PREDICTED)">115</item><item key="FEV1 (% PREDICTED)">116</item><item key="GENDER">female</item><item key="BATCH">1</item><item key="AGE (YEARS)">33</item><item key="PATIENT ID">Control_6</item><item key="CELL TYPE">CD4+ T-cells</item></item></item><item><item key="GSM788309"><item key="MEDICATION">None</item><item key="FVC (% PREDICTED)">96</item><item key="FEV1 (% PREDICTED)">85</item><item key="GENDER">female</item><item key="BATCH">1</item><item key="AGE (YEARS)">31</item><item key="PATIENT ID">Control_7</item><item key="CELL TYPE">CD4+ T-cells</item></item></item><item><item key="GSM788310"><item key="MEDICATION">None</item><item key="FVC (% PREDICTED)">111</item><item key="FEV1 (% PREDICTED)">111</item><item key="GENDER">male</item><item key="BATCH">1</item><item key="AGE (YEARS)">56</item><item key="PATIENT ID">Control_8</item><item key="CELL TYPE">CD4+ T-cells</item></item></item><item><item key="GSM7883"><item key="MEDICATION">Flixotide 500mcg 2pbd,Oxis 12 1pbd,Loratadine 1 tab od,Beconase 2pbd</item><item key="FVC (% PREDICTED)">105</item><item key="FEV1 (% PREDICTED)">82</item><item key="GENDER">female</item><item key="BATCH">1</item><item key="AGE (YEARS)">55</item><item key="PATIENT ID">Severe_1</item><item key="CELL TYPE">CD4+ T-cells</item></item></item><item><item key="GSM788312"><item key="MEDICATION">Prednisolone 8mg - 1mg for 5wks(stopped 30/5/08),seretide 500mcg 1pbd,Singular 10mg bd,Phyllocontin 225mg am 450mg pm,Ventolin prn</item><item key="FVC (% PREDICTED)">101</item><item key="FEV1 (% PREDICTED)">105</item><item key="GENDER">female</item><item key="BATCH">1</item><item key="AGE (YEARS)">21</item><item key="PATIENT ID">Severe_2</item><item key="CELL TYPE">CD4+ T-cells</item></item></item><item><item key="GSM788313"><item key="MEDICATION">prednisolone 15mg od,Seretide 500mcg 2pbd,Montelukast 10mg nocte,Ventolin prn,Phyllocontin 450mg bd,Flixonase od</item><item key="FVC (% PREDICTED)">113</item><item key="FEV1 (% PREDICTED)">98</item><item key="GENDER">male</item><item key="BATCH">1</item><item key="AGE (YEARS)">32</item><item key="PATIENT ID">Severe_3</item><item key="CELL TYPE">CD4+ T-cells</item></item></item><item><item key="GSM788314"><item key="MEDICATION">Prednisolone 10mg od,Spiriva 18mcg od,Methotrexate 12.5mg wkly, Seretode 500 1pbd,Fosamax 70mg once/wk,Folic acid 5mg od,Calchichew,Cocodamol prn</item><item key="FVC (% PREDICTED)">81</item><item key="FEV1 (% PREDICTED)">65</item><item key="GENDER">female</item><item key="BATCH">1</item><item key="AGE (YEARS)">55</item><item key="PATIENT ID">Severe_4</item><item key="CELL TYPE">CD4+ T-cells</item></item></item><item><item key="GSM788315"><item key="MEDICATION">Prednisolone 5mg od,Montelukast 10mg od,Symbicort 400/12 2pbd,Omeprazole 20mg od,Uniphyllin 400mg bd,Bricanyl prn</item><item key="FVC (% PREDICTED)">61</item><item key="FEV1 (% PREDICTED)">44</item><item key="GENDER">female</item><item key="BATCH">1</item><item key="AGE (YEARS)">54</item><item key="PATIENT ID">Severe_5</item><item key="CELL TYPE">CD4+ T-cells</item></item></item><item><item key="GSM788316"><item key="MEDICATION">Prednisolone 10-20mg od,Combivent neb 2-4/day,Cetirizine 10mg od,Terbutaline 500mcg od,Budesonide 400mcg 2pbd, Aminophylline SR 450mg bd, Formoterol 12mcg 2pbd</item><item key="FVC (% PREDICTED)">69</item><item key="FEV1 (% PREDICTED)">55</item><item key="GENDER">female</item><item key="BATCH">1</item><item key="AGE (YEARS)">54</item><item key="PATIENT ID">Severe_6</item><item key="CELL TYPE">CD4+ T-cells</item></item></item><item><item key="GSM788317"><item key="MEDICATION">Prednisolone 10mg od, Insulin S/C,Seretide 500mcg 2pbd, Metformin,Nexium, Flixonase,Tramacet,Calcium,Valsartan,Amitriptyline</item><item key="FVC (% PREDICTED)">105</item><item key="FEV1 (% PREDICTED)">71</item><item key="GENDER">female</item><item key="BATCH">1</item><item key="AGE (YEARS)">45</item><item key="PATIENT ID">Severe_7</item><item key="CELL TYPE">CD4+ T-cells</item></item></item><item><item key="GSM788318"><item key="MEDICATION">Prednisolone 5mg od, Aminophylline 225mg bd,Seretide 500 2pbd,doxycycline, Tiotropium</item><item key="FVC (% PREDICTED)">94</item><item key="FEV1 (% PREDICTED)">33</item><item key="GENDER">female</item><item key="BATCH">1</item><item key="AGE (YEARS)">42</item><item key="PATIENT ID">Severe_8</item><item key="CELL TYPE">CD4+ T-cells</item></item></item><item><item key="GSM788319"><item key="MEDICATION">Becotide, Ventolin</item><item key="FVC (% PREDICTED)">98</item><item key="FEV1 (% PREDICTED)">82</item><item key="GENDER">male</item><item key="BATCH">2</item><item key="AGE (YEARS)">23</item><item key="PATIENT ID">Non_severe_1</item><item key="CELL TYPE">CD8+ T-cells</item></item></item><item><item key="GSM788320"><item key="MEDICATION">flixotide</item><item key="FVC (% PREDICTED)">92</item><item key="FEV1 (% PREDICTED)">87</item><item key="GENDER">female</item><item key="BATCH">2</item><item key="AGE (YEARS)">44</item><item key="PATIENT ID">Non_severe_2</item><item key="CELL TYPE">CD8+ T-cells</item></item></item><item><item key="GSM78832"><item key="MEDICATION">Becotide, Ventolin</item><item key="FVC (% PREDICTED)">89</item><item key="FEV1 (% PREDICTED)">77</item><item key="GENDER">male</item><item key="BATCH">2</item><item key="AGE (YEARS)">35</item><item key="PATIENT ID">Non_severe_3</item><item key="CELL TYPE">CD8+ T-cells</item></item></item><item><item key="GSM788322"><item key="MEDICATION">Salbutamol</item><item key="FVC (% PREDICTED)">81</item><item key="FEV1 (% PREDICTED)">84</item><item key="GENDER">female</item><item key="BATCH">2</item><item key="AGE (YEARS)">23</item><item key="PATIENT ID">Non_severe_4</item><item key="CELL TYPE">CD8+ T-cells</item></item></item><item><item key="GSM788323"><item key="MEDICATION">Flixotide 500mcg 2pbd,Oxis 12 1pbd,Loratadine 1 tab od,Beconase 2pbd</item><item key="FVC (% PREDICTED)">105</item><item key="FEV1 (% PREDICTED)">82</item><item key="GENDER">female</item><item key="BATCH">1</item><item key="AGE (YEARS)">55</item><item key="PATIENT ID">Severe_1</item><item key="CELL TYPE">CD8+ T-cells</item></item></item><item><item key="GSM788324"><item key="MEDICATION">Prednisolone 8mg - 1mg for 5wks(stopped 30/5/08),seretide 500mcg 1pbd,Singular 10mg bd,Phyllocontin 225mg am 450mg pm,Ventolin prn</item><item key="FVC (% PREDICTED)">101</item><item key="FEV1 (% PREDICTED)">105</item><item key="GENDER">female</item><item key="BATCH">1</item><item key="AGE (YEARS)">21</item><item key="PATIENT ID">Severe_2</item><item key="CELL TYPE">CD8+ T-cells</item></item></item><item><item key="GSM788325"><item key="MEDICATION">prednisolone 15mg od,Seretide 500mcg 2pbd,Montelukast 10mg nocte,Ventolin prn,Phyllocontin 450mg bd,Flixonase od</item><item key="FVC (% PREDICTED)">113</item><item key="FEV1 (% PREDICTED)">98</item><item key="GENDER">male</item><item key="BATCH">1</item><item key="AGE (YEARS)">32</item><item key="PATIENT ID">Severe_3</item><item key="CELL TYPE">CD8+ T-cells</item></item></item><item><item key="GSM788326"><item key="MEDICATION">Prednisolone 10mg od,Spiriva 18mcg od,Methotrexate 12.5mg wkly, Seretode 500 1pbd,Fosamax 70mg once/wk,Folic acid 5mg od,Calchichew,Cocodamol prn</item><item key="FVC (% PREDICTED)">81</item><item key="FEV1 (% PREDICTED)">65</item><item key="GENDER">female</item><item key="BATCH">1</item><item key="AGE (YEARS)">55</item><item key="PATIENT ID">Severe_4</item><item key="CELL TYPE">CD8+ T-cells</item></item></item><item><item key="GSM788327"><item key="MEDICATION">Prednisolone 5mg od,Montelukast 10mg od,Symbicort 400/12 2pbd,Omeprazole 20mg od,Uniphyllin 400mg bd,Bricanyl prn</item><item key="FVC (% PREDICTED)">61</item><item key="FEV1 (% PREDICTED)">44</item><item key="GENDER">female</item><item key="BATCH">1</item><item key="AGE (YEARS)">54</item><item key="PATIENT ID">Severe_5</item><item key="CELL TYPE">CD8+ T-cells</item></item></item><item><item key="GSM788328"><item key="MEDICATION">Prednisolone 10-20mg od,Combivent neb 2-4/day,Cetirizine 10mg od,Terbutaline 500mcg od,Budesonide 400mcg 2pbd, Aminophylline SR 450mg bd, Formoterol 12mcg 2pbd</item><item key="FVC (% PREDICTED)">69</item><item key="FEV1 (% PREDICTED)">55</item><item key="GENDER">female</item><item key="BATCH">1</item><item key="AGE (YEARS)">54</item><item key="PATIENT ID">Severe_6</item><item key="CELL TYPE">CD8+ T-cells</item></item></item><item><item key="GSM788329"><item key="MEDICATION">Prednisolone 10mg od, Insulin S/C,Seretide 500mcg 2pbd, Metformin,Nexium, Flixonase,Tramacet,Calcium,Valsartan,Amitriptyline</item><item key="FVC (% PREDICTED)">105</item><item key="FEV1 (% PREDICTED)">71</item><item key="GENDER">female</item><item key="BATCH">1</item><item key="AGE (YEARS)">45</item><item key="PATIENT ID">Severe_7</item><item key="CELL TYPE">CD8+ T-cells</item></item></item><item><item key="GSM788330"><item key="MEDICATION">Prednisolone 5mg od, Aminophylline 225mg bd,Seretide 500 2pbd,doxycycline, Tiotropium</item><item key="FVC (% PREDICTED)">94</item><item key="FEV1 (% PREDICTED)">33</item><item key="GENDER">female</item><item key="BATCH">1</item><item key="AGE (YEARS)">42</item><item key="PATIENT ID">Severe_8</item><item key="CELL TYPE">CD8+ T-cells</item></item></item><item><item key="GSM78833"><item key="MEDICATION">None</item><item key="FVC (% PREDICTED)">76</item><item key="FEV1 (% PREDICTED)">78</item><item key="GENDER">male</item><item key="BATCH">1</item><item key="AGE (YEARS)">39</item><item key="PATIENT ID">Control_1</item><item key="CELL TYPE">CD8+ T-cells</item></item></item><item><item key="GSM788332"><item key="MEDICATION">None</item><item key="FVC (% PREDICTED)">107</item><item key="FEV1 (% PREDICTED)">103</item><item key="GENDER">female</item><item key="BATCH">1</item><item key="AGE (YEARS)">25</item><item key="PATIENT ID">Control_2</item><item key="CELL TYPE">CD8+ T-cells</item></item></item><item><item key="GSM788333"><item key="MEDICATION">None</item><item key="FVC (% PREDICTED)">115</item><item key="FEV1 (% PREDICTED)">105</item><item key="GENDER">female</item><item key="BATCH">1</item><item key="AGE (YEARS)">26</item><item key="PATIENT ID">Control_3</item><item key="CELL TYPE">CD8+ T-cells</item></item></item><item><item key="GSM788334"><item key="MEDICATION">None</item><item key="FVC (% PREDICTED)">105</item><item key="FEV1 (% PREDICTED)">92</item><item key="GENDER">male</item><item key="BATCH">1</item><item key="AGE (YEARS)">46</item><item key="PATIENT ID">Control_4</item><item key="CELL TYPE">CD8+ T-cells</item></item></item><item><item key="GSM788335"><item key="MEDICATION">None</item><item key="FVC (% PREDICTED)">77</item><item key="FEV1 (% PREDICTED)">78</item><item key="GENDER">male</item><item key="BATCH">1</item><item key="AGE (YEARS)">33</item><item key="PATIENT ID">Control_5</item><item key="CELL TYPE">CD8+ T-cells</item></item></item><item><item key="GSM788336"><item key="MEDICATION">None</item><item key="FVC (% PREDICTED)">115</item><item key="FEV1 (% PREDICTED)">116</item><item key="GENDER">female</item><item key="BATCH">1</item><item key="AGE (YEARS)">33</item><item key="PATIENT ID">Control_6</item><item key="CELL TYPE">CD8+ T-cells</item></item></item><item><item key="GSM788337"><item key="MEDICATION">None</item><item key="FVC (% PREDICTED)">96</item><item key="FEV1 (% PREDICTED)">85</item><item key="GENDER">female</item><item key="BATCH">1</item><item key="AGE (YEARS)">31</item><item key="PATIENT ID">Control_7</item><item key="CELL TYPE">CD8+ T-cells</item></item></item><item><item key="GSM788338"><item key="MEDICATION">None</item><item key="FVC (% PREDICTED)">111</item><item key="FEV1 (% PREDICTED)">111</item><item key="GENDER">male</item><item key="BATCH">1</item><item key="AGE (YEARS)">56</item><item key="PATIENT ID">Control_8</item><item key="CELL TYPE">CD8+ T-cells</item></item></item></item><item key="id">4220</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">4</item><item key="summary_wrapped">Comparison of mRNA expression showed widespread changes in the circulating CD8+ but not CD4+ T-cells from patients with severe asthma. No...</item><item key="geo_gse_id">E-GEOD-31773</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">8</item><item key="sample_count">40</item><item key="tags"><item>asthma</item><item>cell</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">comparison-of-mrna-expression-in-circulating-t-cel</item><item key="geo_id_plat">E-GEOD-31773_A-AFFY-44</item><item key="name">Comparison of mRNA expression in circulating T-cells from patients with severe asthma</item><item key="created">Sep.16, 2014</item><item key="summary">Comparison of mRNA expression showed widespread changes in the circulating CD8+ but not CD4+ T-cells from patients with severe asthma. No changes were observed in the CD4+ and CD8+ T-cells in non-severe asthmatics versus healthy controls. Bioinformatics analysis showed that the changes in CD8+ T-cell mRNA expression were associated with multiple pathways involved in T-cell activation. As with mRNAs, we also observed widespread changes in expression of non-coding RNA species including natural antisense, pseudogenes, intronic long ncRNAs and long intergenic long ncRNAs in CD8+ T-cells from severe asthmatics. Measurement of the miRNA expression profile showed selective down-regulation of miR-28-5p in CD8+ T-cells and reduction of miR-146a and miR-146b in both CD4+ and CD8+ T-cells. mRNA samples were collected from circulating CD4+ and CD8+ T-cells from healthy donors as well as donors with severe and non-severe asthma.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-31773</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-31773/samples/</item></data></biogps>
