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Home › Dataset Library › Expression data from primary hepatocytes knocking down or overexpressing IRE1a

Dataset: Expression data from primary hepatocytes knocking down or overexpressing IRE1a

The ER-resident protein kinase/endoribonuclease IRE1 is activated through trans-autophosphorylation in response to protein folding...

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The ER-resident protein kinase/endoribonuclease IRE1 is activated through trans-autophosphorylation in response to protein folding overload in the ER lumen and maintains ER homeostasis by triggering a key branch of the unfolded protein response. Here we show that mammalian IRE1a in liver cells is also phosphorylated by a kinase other than itself in response to metabolic stimuli. Glucagon stimulated protein kinase PKA, which in turn phosphorylated IRE1a at Ser724, a highly conserved site within the kinase activation domain. Blocking Ser724 phosphorylation impaired the ability of IRE1a to augment the upregulation by glucagon signaling of the expression of gluconeogenic genes. Moreover, hepatic IRE1a was highly phosphorylated at Ser724 by PKA in mice with obesity, and silencing hepatic IRE1a markedly reduced hyperglycemia and glucose intolerance. Hence, these results suggest that IRE1a integrates signals from both the ER lumen and the cytoplasm in the liver and is coupled to the glucagon signaling in the regulation of glucose metabolism. We used DNA microarray to analyze the transcriptomic change upon IRE1a overexpression or IRE1a depletion in primary hepatocytes, to study the changes related to IRE1a Primary hepatocytes were infected with the desired adenoviruses (Ad-EGFP, Ad-WT, Ad-S724A, Ad-shCON, Ad-shIRE1a#2) or treated with glucagon. Total cellular RNA was isolated with TRIzol (Invitrogen) and subjected to analysis by Affymetrix Mouse Genome 430 2.0 Arrays. Three experiments were independently conducted.

Species:
mouse

Samples:
15

Source:
E-GEOD-31638

Updated:
Dec.12, 2014

Registered:
Nov.11, 2014


Factors: (via ArrayExpress)
Sample TREATMENT GENOTYPE/VARIATION
GSM785818 no treatment EGFP overexpression as control
GSM785818 no treatment EGFP overexpression as control
GSM785818 no treatment EGFP overexpression as control
GSM78582 no treatment IRE1a wildtype overexpression
GSM78582 no treatment IRE1a wildtype overexpression
GSM78582 no treatment IRE1a wildtype overexpression
GSM785824 no treatment IRE1aS724A overexpression
GSM785824 no treatment IRE1aS724A overexpression
GSM785824 no treatment IRE1aS724A overexpression
GSM785827 treated with glucagon for 4 hours knocking down control
GSM785827 treated with glucagon for 4 hours knocking down control
GSM785827 treated with glucagon for 4 hours knocking down control
GSM785830 treated with glucagon for 4 hours IRE1a knocking down
GSM785830 treated with glucagon for 4 hours IRE1a knocking down
GSM785830 treated with glucagon for 4 hours IRE1a knocking down

Tags

  • cytoplasm
  • genome
  • glucagon
  • glucose
  • glucose intolerance
  • hyperglycemia
  • liver
  • obesity
  • protein

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