Dataset: Transcriptome transfer provides a model for understanding the phenotype of cardiomyocytes
We show that the transfer of the adult ventricular myocyte (AVM) transcriptome into either a fibroblast or an astrocyte converts the host...
We show that the transfer of the adult ventricular myocyte (AVM) transcriptome into either a fibroblast or an astrocyte converts the host cell into a cardiomyocyte. Transcriptome-effected cardiomyocytes (tCardiomyocytes) display morphologies, immunocytochemical properties, and expression profiles of postnatal cardiomyocytes. Cell morphology analysis shows that tCardiomyoctes are elongated and have a similar length-to-width ratio as AVMs. These global phenotypic changes occur in a time-dependent manner and confer electroexcitability to the tCardiomyocytes. tCardiomyocyte generation does not require continuous overexpression of specific transcription factors; for example, the expression level of transcription factor Mef2c is higher in tCardiomyocytes than in fibroblasts, but similar in tCardiomyocytes and AVMs. These data highlight the dominant role of the gene expression profile in developing and maintaining cellular phenotype. The transcriptomeinduced phenotype remodeling–generated tCardiomyocyte has significant implications for understanding and modulating cardiac disease development. Transcriptome transfer can change one cell type to another cell type. We transfect cardiomyocyte transciptome into fibroblast and astrocyte. Transcriptomes from single cells are isolated and amplified and then hybridize on Affymetrix array.
- Species:
- mouse
- Samples:
- 23
- Source:
- E-GEOD-30164
- Updated:
- Dec.12, 2014
- Registered:
- Nov.11, 2014
Sample | TRANSFECTED TRANSCRIPTOME | CELL TYPE |
---|---|---|
GSM747040 | cadiomyocyte | cardiomyocyte transcriptome TIPeRed fibroblast, single cell |
GSM747040 | cadiomyocyte | cardiomyocyte transcriptome TIPeRed fibroblast, single cell |
GSM747040 | cadiomyocyte | cardiomyocyte transcriptome TIPeRed fibroblast, single cell |
GSM747040 | cadiomyocyte | cardiomyocyte transcriptome TIPeRed fibroblast, single cell |
GSM747040 | cadiomyocyte | cardiomyocyte transcriptome TIPeRed fibroblast, single cell |
GSM747045 | fibroblast | fibroblast transcriptome TIPeRed fibroblast, single cell |
GSM747045 | fibroblast | fibroblast transcriptome TIPeRed fibroblast, single cell |
GSM747045 | fibroblast | fibroblast transcriptome TIPeRed fibroblast, single cell |
GSM747048 | No transfection | fibroblast, single cell |
GSM747048 | No transfection | fibroblast, single cell |
GSM747048 | No transfection | fibroblast, single cell |
GSM74705 | No transfection | cardiomyocyte, single cell |
GSM74705 | No transfection | cardiomyocyte, single cell |
GSM74705 | No transfection | cardiomyocyte, single cell |
GSM74705 | No transfection | cardiomyocyte, single cell |
GSM747055 | cardiomyoyte | cardiomyocyte transcriptome TIPeRed astrocyte, single cell |
GSM747055 | cardiomyoyte | cardiomyocyte transcriptome TIPeRed astrocyte, single cell |
GSM747055 | cardiomyoyte | cardiomyocyte transcriptome TIPeRed astrocyte, single cell |
GSM747055 | cardiomyoyte | cardiomyocyte transcriptome TIPeRed astrocyte, single cell |
GSM747055 | cardiomyoyte | cardiomyocyte transcriptome TIPeRed astrocyte, single cell |
GSM747055 | cardiomyoyte | cardiomyocyte transcriptome TIPeRed astrocyte, single cell |
GSM74706 | mock transfection | mock transfected astrocyte, single cell |
GSM74706 | mock transfection | mock transfected astrocyte, single cell |