BioGPS
  • Home
  • Help
  • Plugins
  • Datasets
  • Sign Up
  • Login
Examples: Gene Symbol(s), Gene Ontology, Splicing plugins, Melanoma datasets
advanced
Home › Dataset Library › Expression data from mouse small intestinal γδ intraepithelial lymphocytes

Dataset: Expression data from mouse small intestinal γδ intraepithelial lymphocytes

The mammalian gastrointestinal tract harbors thousands of bacterial species that include symbionts as well as potential pathogens. The...

Registered by ArrayExpress Uploader
View Dataset

The mammalian gastrointestinal tract harbors thousands of bacterial species that include symbionts as well as potential pathogens. The immune responses that limit access of these bacteria to underlying tissue remain poorly defined. In this study, we used microarrays to uncover the transcriptional responses that occur in small intestinal γδ intraepithelial lymphocytes following bacterial challenge. γδ intraepithelial lymphocytes (γδ IEL) were isolated by flow cytometry from the small intestines of germ-free mice, or from age- and sex-matched conventionally-raised counterparts. We extracted RNAs from these purified γδ IEL for analysis on Affymetrix DNA microarrays. The mice were all >8 weeks in age, and each sample represents a pool of RNAs from 5-8 mice.

Species:
mouse

Samples:
4

Source:
E-GEOD-28437

PubMed:
21555560

Updated:
Dec.12, 2014

Registered:
Nov.11, 2014


Factors: (via ArrayExpress)
Sample INTESTINAL COLONIZATION
GSM703047 conventionally-colonized
GSM703047 conventionally-colonized
GSM703049 germ-free
GSM703049 germ-free

Tags

  • gastrointestinal tract
  • tract

Other Formats

JSON    XML
  • About
  • Blog
  • Help
  • FAQ
  • Downloads
  • API
  • iPhone App
  • Email updates
© 2025 The Scripps Research Institute. All rights reserved. (ver 94eefe6 )
  • Terms of Use