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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="id">6403</item><item key="factors"><item><item key="GSM688773"><item key="TISSUE">prefrontal cortex</item><item key="GENOTYPE/VARIATION">APLP2-KO (APLP2-/-)</item></item></item><item><item key="GSM688774"><item key="TISSUE">hippocampus</item><item key="GENOTYPE/VARIATION">APLP2-KO (APLP2-/-)</item></item></item><item><item key="GSM688773"><item key="TISSUE">prefrontal cortex</item><item key="GENOTYPE/VARIATION">APLP2-KO (APLP2-/-)</item></item></item><item><item key="GSM688774"><item key="TISSUE">hippocampus</item><item key="GENOTYPE/VARIATION">APLP2-KO (APLP2-/-)</item></item></item><item><item key="GSM688773"><item key="TISSUE">prefrontal cortex</item><item key="GENOTYPE/VARIATION">APLP2-KO (APLP2-/-)</item></item></item><item><item key="GSM688774"><item key="TISSUE">hippocampus</item><item key="GENOTYPE/VARIATION">APLP2-KO (APLP2-/-)</item></item></item><item><item key="GSM688779"><item key="TISSUE">prefrontal cortex</item><item key="GENOTYPE/VARIATION">APPs&#945;-DM (APP&#945;/&#945;APLP2-/-)</item></item></item><item><item key="GSM688780"><item key="TISSUE">hippocampus</item><item key="GENOTYPE/VARIATION">APPs&#945;-DM (APP&#945;/&#945;APLP2-/-)</item></item></item><item><item key="GSM688779"><item key="TISSUE">prefrontal cortex</item><item key="GENOTYPE/VARIATION">APPs&#945;-DM (APP&#945;/&#945;APLP2-/-)</item></item></item><item><item key="GSM688780"><item key="TISSUE">hippocampus</item><item key="GENOTYPE/VARIATION">APPs&#945;-DM (APP&#945;/&#945;APLP2-/-)</item></item></item><item><item key="GSM688779"><item key="TISSUE">prefrontal cortex</item><item key="GENOTYPE/VARIATION">APPs&#945;-DM (APP&#945;/&#945;APLP2-/-)</item></item></item><item><item key="GSM688780"><item key="TISSUE">hippocampus</item><item key="GENOTYPE/VARIATION">APPs&#945;-DM (APP&#945;/&#945;APLP2-/-)</item></item></item></item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">6</item><item key="summary_wrapped">Despite its key role in Alzheimer pathogenesis, the physiological function(s) of the amyloid precursor protein (APP) and of its...</item><item key="pubmed_id">21522131</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">2</item><item key="sample_count">12</item><item key="tags"><item>basal</item><item>cortex</item><item>hippocampus</item><item>prefrontal cortex</item><item>protein</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_id_plat">E-GEOD-27888_A-AFFY-45</item><item key="slug">comparative-transcriptome-analysis-of-apps-dm-and</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-27888</item><item key="geo_gds_id"/><item key="name">Comparative transcriptome analysis of APPs&#945;-DM and APLP2-KO brains</item><item key="created">Nov.11, 2014</item><item key="summary">Despite its key role in Alzheimer pathogenesis, the physiological function(s) of the amyloid precursor protein (APP) and of its proteolytic fragments are still poorly understood. The secreted APPs&#945; ectodomain has been shown to be involved in neuroprotection and synaptic plasticity. The &#947;-secretase generated APP intracellular domain, AICD, functions as a transcriptional regulator in heterologous reporter assays although its role for endogenous gene regulation has remained controversial. Previously, we have generated APPs&#945; knockin (KI) mice expressing solely the secreted ectodomain APPs&#945;. Here, we generated double mutants (APPs&#945;-DM) by crossing APPs&#945;-KI mice onto an APLP2-deficient background and show that APPs&#945; rescues the postnatal lethality of the majority of APP/APLP2 double knockout mice. Despite normal CNS morphology and unaltered basal synaptic transmission, young APPs&#945;-DM mice already showed pronounced hippocampal dysfunction, impaired spatial learning and a deficit in LTP. To gain further mechanistic insight into which domains/proteolytic fragments are crucial for hippocampal APP/APLP2 mediated functions, we performed a DNA microarray transcriptome profiling of prefrontal cortex and hippocampus of adult APLP2-KO (APLP2-/-) and APPs&#945;-DM mice (APP&#945;/&#945;APLP2-/- mice).Interestingly, this analysis failed to reveal major genotype-related transcriptional differences. Expression differences between cortex and hippocampus were, however, readily detectable. Prefrontal cortices and hippocampi of adult mice (38 - 40 weeks) of the following genotypes were analyzed: APLP2-KO (APLP2-/-) (n=3) and APPs&#945;-DM (APP&#945;/&#945;APLP2-/-) (n=3).</item><item key="geo_gse_id">E-GEOD-27888</item><item key="species">mouse</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-27888/samples/</item></data></biogps>
