<?xml version="1.0" encoding="ASCII"?>
<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">mouse</item><item key="factors"><item><item key="GSM685456"><item key="STRAIN BACKGROUND">LSL-KrasG12D x C57/Bl6</item><item key="TISSUE">stroma</item><item key="GENOTYPE/VARIATION">KrasTgfbr2wt</item></item></item><item><item key="GSM685456"><item key="STRAIN BACKGROUND">LSL-KrasG12D x C57/Bl6</item><item key="TISSUE">stroma</item><item key="GENOTYPE/VARIATION">KrasTgfbr2wt</item></item></item><item><item key="GSM685456"><item key="STRAIN BACKGROUND">LSL-KrasG12D x C57/Bl6</item><item key="TISSUE">stroma</item><item key="GENOTYPE/VARIATION">KrasTgfbr2wt</item></item></item><item><item key="GSM685459"><item key="STRAIN BACKGROUND">LSL-KrasG12D x C57/Bl6 x Tgfbr2 flox/flox</item><item key="TISSUE">stroma</item><item key="GENOTYPE/VARIATION">KrasTgfbr2-/-</item></item></item><item><item key="GSM685459"><item key="STRAIN BACKGROUND">LSL-KrasG12D x C57/Bl6 x Tgfbr2 flox/flox</item><item key="TISSUE">stroma</item><item key="GENOTYPE/VARIATION">KrasTgfbr2-/-</item></item></item><item><item key="GSM685459"><item key="STRAIN BACKGROUND">LSL-KrasG12D x C57/Bl6 x Tgfbr2 flox/flox</item><item key="TISSUE">stroma</item><item key="GENOTYPE/VARIATION">KrasTgfbr2-/-</item></item></item><item><item key="GSM685459"><item key="STRAIN BACKGROUND">LSL-KrasG12D x C57/Bl6 x Tgfbr2 flox/flox</item><item key="TISSUE">stroma</item><item key="GENOTYPE/VARIATION">KrasTgfbr2-/-</item></item></item><item><item key="GSM685463"><item key="STRAIN BACKGROUND">LSL-KrasG12D x C57/Bl6</item><item key="TISSUE">lung tumor</item><item key="GENOTYPE/VARIATION">KrasTgfbr2wt</item></item></item><item><item key="GSM685463"><item key="STRAIN BACKGROUND">LSL-KrasG12D x C57/Bl6</item><item key="TISSUE">lung tumor</item><item key="GENOTYPE/VARIATION">KrasTgfbr2wt</item></item></item><item><item key="GSM685463"><item key="STRAIN BACKGROUND">LSL-KrasG12D x C57/Bl6</item><item key="TISSUE">lung tumor</item><item key="GENOTYPE/VARIATION">KrasTgfbr2wt</item></item></item><item><item key="GSM685466"><item key="STRAIN BACKGROUND">LSL-KrasG12D x C57/Bl6 x Tgfbr2 flox/flox</item><item key="TISSUE">lung tumor</item><item key="GENOTYPE/VARIATION">KrasTgfbr2-/-</item></item></item><item><item key="GSM685466"><item key="STRAIN BACKGROUND">LSL-KrasG12D x C57/Bl6 x Tgfbr2 flox/flox</item><item key="TISSUE">lung tumor</item><item key="GENOTYPE/VARIATION">KrasTgfbr2-/-</item></item></item><item><item key="GSM685466"><item key="STRAIN BACKGROUND">LSL-KrasG12D x C57/Bl6 x Tgfbr2 flox/flox</item><item key="TISSUE">lung tumor</item><item key="GENOTYPE/VARIATION">KrasTgfbr2-/-</item></item></item><item><item key="GSM685466"><item key="STRAIN BACKGROUND">LSL-KrasG12D x C57/Bl6 x Tgfbr2 flox/flox</item><item key="TISSUE">lung tumor</item><item key="GENOTYPE/VARIATION">KrasTgfbr2-/-</item></item></item></item><item key="id">6385</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">6</item><item key="summary_wrapped">Recent data suggests that repression of the Type II TGF-B Receptor (Tgfr2) repression in human lung adenocarcinoma is important for...</item><item key="geo_gse_id">E-GEOD-27675</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">3</item><item key="sample_count">14</item><item key="tags"><item>adenocarcinoma</item><item>cancer</item><item>cell</item><item>compartment</item><item>lung</item><item>lung adenocarcinoma</item><item>lung cancer</item><item>stromal cell</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">expression-data-from-lung-tumor-and-stromal-cells</item><item key="geo_id_plat">E-GEOD-27675_A-AFFY-45</item><item key="name">Expression data from lung tumor and stromal cells of KrasTgfbr2 -/- mouse model</item><item key="created">Nov.11, 2014</item><item key="summary">Recent data suggests that repression of the Type II TGF-B Receptor (Tgfr2) repression in human lung adenocarcinoma is important for progression from noninvasive to invasive adenocarcinoma. To test this hypothesis in a animal model of non-invasive lung cancer, we generated an inducible, lung specific Tgfbr2 knockout model in the oncogenic Kras mouse. LSL-KrasG12D positive mice were simultaneously backcrossed to C57/Bl6 mice and to the Tgfbr2 flox/flox mice. To induce tumors, 100 ul of saline containing 3x10e10 particles of an adenovirus containing the Cre recombinase (Ad.Cre) was administered to each LSL-KrasG12D mouse intra-nasally. We evaluated the tumor microenvironment response to Tgfbr2 deficient tumor cells.  We compared lung tumor cell and stromal cell transcriptional profiles from five-week KrasTgfbr2 -/-  and nine-week KrasTgfbr2 WT mice. We used mice at these time points to allow comparison of the stromal compartment of similarly advanced tumors.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-27675</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-27675/samples/</item></data></biogps>
