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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="id">3913</item><item key="factors"><item><item key="GSM6514"><item key="phenotype">naive</item></item></item><item><item key="GSM6514"><item key="phenotype">naive</item></item></item><item><item key="GSM6514"><item key="phenotype">naive</item></item></item><item><item key="GSM6514"><item key="phenotype">naive</item></item></item><item><item key="GSM651416"><item key="phenotype">high PD-1 expression</item></item></item><item><item key="GSM651416"><item key="phenotype">high PD-1 expression</item></item></item><item><item key="GSM651416"><item key="phenotype">high PD-1 expression</item></item></item><item><item key="GSM651416"><item key="phenotype">high PD-1 expression</item></item></item><item><item key="GSM651416"><item key="phenotype">high PD-1 expression</item></item></item><item><item key="GSM651416"><item key="phenotype">high PD-1 expression</item></item></item><item><item key="GSM651423"><item key="phenotype">low PD-1 expression</item></item></item><item><item key="GSM651423"><item key="phenotype">low PD-1 expression</item></item></item><item><item key="GSM651423"><item key="phenotype">low PD-1 expression</item></item></item><item><item key="GSM651423"><item key="phenotype">low PD-1 expression</item></item></item><item><item key="GSM651423"><item key="phenotype">low PD-1 expression</item></item></item><item><item key="GSM651423"><item key="phenotype">low PD-1 expression</item></item></item></item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">4</item><item key="summary_wrapped">T cell dysfunction is an important feature of many chronic viral infections. In particular, it was shown that PD-1 regulates T cell...</item><item key="pubmed_id">21383243</item><item key="geo_gse_id">E-GEOD-26495</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">1</item><item key="sample_count">16</item><item key="tags"><item>cell</item><item>peripheral</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">transcription-profiling-by-array-of-human-cd8-posi</item><item key="geo_id_plat">E-GEOD-26495_A-AFFY-44</item><item key="name">Transcription profiling by array of human CD8-positive T cells with high or low programmed death-1 expression</item><item key="created">Sep.15, 2014</item><item key="summary">T cell dysfunction is an important feature of many chronic viral infections. In particular, it was shown that PD-1 regulates T cell dysfunction during chronic LCMV infection in mice and PD-1 high cells exhibit an intense exhausted gene signature. These findings were extended to human chronic infections such as HIV, HCV and HBV. However, it is not known if PD-1 high cells of healthy humans have the traits of exhausted cells. In this study, we provide a comprehensive description of phenotype, function and gene expression profiles of PD-1 high versus PD-1 low CD8 T cells in the peripheral blood of healthy human adults as following: 1) The percentage of naive and memory CD8 T cells varied widely in the peripheral blood cells of healthy humans and PD-1 was expressed by the memory CD8 T cells. 2) PD-1 high CD8 T cells in healthy humans did not significantly correlated with the PD-1 high exhausted gene signature of HIV specific human CD8 T cells or chronic LCMV specific CD8 T cells from mice. 3) PD-1 expression did not directly affect the ability of CD8 T cells to secrete cytokines in healthy adults. 4) PD-1 was expressed by the effector memory (TEM) compared to &#8216;terminally differentiated effector&#8217; (TEMRA) CD8 T cells. 5) Finally, an interesting inverse relationship between CD45RA and PD-1 expression was observed. We used highly purified PD-1 high and PD-1 low from six healthy adult individuals and naive CD8 T cell populations from four of those individuals for gene expression studies</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-26495</item><item key="species">human</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-26495/samples/</item></data></biogps>
