<?xml version="1.0" encoding="ASCII"?>
<biogps><data><item key="platform">6</item><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">mouse</item><item key="factors"><item><item key="GSM616130"><item key="ACTIVATION">control</item><item key="MOUSE">1</item><item key="TREATMENT">control</item><item key="VARIATION">Wild-type</item></item></item><item><item key="GSM61613"><item key="ACTIVATION">control</item><item key="MOUSE">1</item><item key="TREATMENT">rosiglitazone</item><item key="VARIATION">Wild-type</item></item></item><item><item key="GSM616132"><item key="ACTIVATION">IL-4</item><item key="MOUSE">1</item><item key="TREATMENT">control</item><item key="VARIATION">Wild-type</item></item></item><item><item key="GSM616133"><item key="ACTIVATION">IL-4</item><item key="MOUSE">1</item><item key="TREATMENT">rosiglitazone</item><item key="VARIATION">Wild-type</item></item></item><item><item key="GSM616134"><item key="ACTIVATION">control</item><item key="MOUSE">2</item><item key="TREATMENT">control</item><item key="VARIATION">Wild-type</item></item></item><item><item key="GSM616135"><item key="ACTIVATION">control</item><item key="MOUSE">2</item><item key="TREATMENT">rosiglitazone</item><item key="VARIATION">Wild-type</item></item></item><item><item key="GSM616136"><item key="ACTIVATION">IL-4</item><item key="MOUSE">2</item><item key="TREATMENT">control</item><item key="VARIATION">Wild-type</item></item></item><item><item key="GSM616137"><item key="ACTIVATION">IL-4</item><item key="MOUSE">2</item><item key="TREATMENT">rosiglitazone</item><item key="VARIATION">Wild-type</item></item></item><item><item key="GSM616138"><item key="ACTIVATION">control</item><item key="MOUSE">3</item><item key="TREATMENT">control</item><item key="VARIATION">Wild-type</item></item></item><item><item key="GSM616139"><item key="ACTIVATION">control</item><item key="MOUSE">3</item><item key="TREATMENT">rosiglitazone</item><item key="VARIATION">Wild-type</item></item></item><item><item key="GSM616140"><item key="ACTIVATION">IL-4</item><item key="MOUSE">3</item><item key="TREATMENT">control</item><item key="VARIATION">Wild-type</item></item></item><item><item key="GSM61614"><item key="ACTIVATION">IL-4</item><item key="MOUSE">3</item><item key="TREATMENT">rosiglitazone</item><item key="VARIATION">Wild-type</item></item></item><item><item key="GSM616142"><item key="ACTIVATION">control</item><item key="MOUSE">4</item><item key="TREATMENT">control</item><item key="VARIATION">STAT6 KO</item></item></item><item><item key="GSM616143"><item key="ACTIVATION">control</item><item key="MOUSE">4</item><item key="TREATMENT">rosiglitazone</item><item key="VARIATION">STAT6 KO</item></item></item><item><item key="GSM616144"><item key="ACTIVATION">IL-4</item><item key="MOUSE">4</item><item key="TREATMENT">control</item><item key="VARIATION">STAT6 KO</item></item></item><item><item key="GSM616145"><item key="ACTIVATION">IL-4</item><item key="MOUSE">4</item><item key="TREATMENT">rosiglitazone</item><item key="VARIATION">STAT6 KO</item></item></item><item><item key="GSM616146"><item key="ACTIVATION">control</item><item key="MOUSE">5</item><item key="TREATMENT">control</item><item key="VARIATION">STAT6 KO</item></item></item><item><item key="GSM616147"><item key="ACTIVATION">control</item><item key="MOUSE">5</item><item key="TREATMENT">rosiglitazone</item><item key="VARIATION">STAT6 KO</item></item></item><item><item key="GSM616148"><item key="ACTIVATION">IL-4</item><item key="MOUSE">5</item><item key="TREATMENT">control</item><item key="VARIATION">STAT6 KO</item></item></item><item><item key="GSM616149"><item key="ACTIVATION">IL-4</item><item key="MOUSE">5</item><item key="TREATMENT">rosiglitazone</item><item key="VARIATION">STAT6 KO</item></item></item><item><item key="GSM616150"><item key="ACTIVATION">control</item><item key="MOUSE">6</item><item key="TREATMENT">control</item><item key="VARIATION">STAT6 KO</item></item></item><item><item key="GSM61615"><item key="ACTIVATION">control</item><item key="MOUSE">6</item><item key="TREATMENT">rosiglitazone</item><item key="VARIATION">STAT6 KO</item></item></item><item><item key="GSM616152"><item key="ACTIVATION">IL-4</item><item key="MOUSE">6</item><item key="TREATMENT">control</item><item key="VARIATION">STAT6 KO</item></item></item><item><item key="GSM616153"><item key="ACTIVATION">IL-4</item><item key="MOUSE">6</item><item key="TREATMENT">rosiglitazone</item><item key="VARIATION">STAT6 KO</item></item></item></item><item key="id">6256</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-25088</item><item key="summary_wrapped">C57Bl/6 wild-type and STAT6 KO mice were used to study PPARg and IL-4 signaling. Bone marrow of 3 mice per group was isolated and...</item><item key="pubmed_id">21093321</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">4</item><item key="sample_count">24</item><item key="tags"><item>bone</item><item>bone marrow</item><item>genome</item><item>macrophage</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">pparg-and-il-4-induced-gene-expression-data-from-w</item><item key="geo_id_plat">E-GEOD-25088_A-AFFY-45</item><item key="name">PPARg and IL-4-induced gene expression data from wild-type and STAT6 knockout mouse bone marrow-derived macrophages</item><item key="created">Nov.11, 2014</item><item key="summary">C57Bl/6 wild-type and STAT6 KO mice were used to study PPARg and IL-4 signaling. Bone marrow of 3 mice per group was isolated and differentiated to macrophages with M-CSF (20 ng/ml). 20 ng/ml IL-4 was used to induce alternative macrophage activation and 1 uM Rosiglitazone (RSG) was used to activate PPARg. From each mouse 4 samples were generated: 1. M-CSF, 2. M-CSF+RSG, 3. IL-4 and 4. IL-4+RSG. All compounds were added throughout the whole differentiation process, and frech media was added every other day. Control cells were treated with vehicle (DMSO:ethanol). After 10 days, RNA was isolated and gene expression profiles were analyzed using Mouse Genome 430 2.0 microarrays from Affymetrix. 3 C57Bl/6 wild-type and 3 STAT6 KO mice were used to isolate bone marrow and from each macrophages were differentiated with or without IL-4 and simultaneously treated with vehicle or RSG. Altogether we analyzed 24 samples with 3 biological replicates as below.</item><item key="geo_gse_id">E-GEOD-25088</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-25088/samples/</item></data></biogps>
