{"owner": "ArrayExpress Uploader", "ownerprofile_id": "arrayexpress_sid", "species": "mouse", "factors": [{"GSM605702": {"IMMUNIZATION STATUS": "immunized mice (Day 7)", "CELL TYPE": "CXCR5hi PD-1hi YFP-BCL6+ cells", "ORGANISM PART": "Lymph Nodes"}}, {"GSM605702": {"IMMUNIZATION STATUS": "immunized mice (Day 7)", "CELL TYPE": "CXCR5hi PD-1hi YFP-BCL6+ cells", "ORGANISM PART": "Lymph Nodes"}}, {"GSM605702": {"IMMUNIZATION STATUS": "immunized mice (Day 7)", "CELL TYPE": "CXCR5hi PD-1hi YFP-BCL6+ cells", "ORGANISM PART": "Lymph Nodes"}}, {"GSM605705": {"IMMUNIZATION STATUS": "immunized mice (Day 10)", "CELL TYPE": "CXCR5hi PD-1hi YFP-BCL6+ cells", "ORGANISM PART": "Lymph Nodes"}}, {"GSM605706": {"IMMUNIZATION STATUS": "immunized mice (Day 10)", "CELL TYPE": "CXCR5hi PD-1hi YFP-BCL6- cells", "ORGANISM PART": "Lymph Nodes"}}, {"GSM605707": {"IMMUNIZATION STATUS": "immunized mice (Day 7)", "CELL TYPE": "CXCR5hi PD-1hi YFP-BCL6- cells", "ORGANISM PART": "Lymph Nodes"}}, {"GSM605707": {"IMMUNIZATION STATUS": "immunized mice (Day 7)", "CELL TYPE": "CXCR5hi PD-1hi YFP-BCL6- cells", "ORGANISM PART": "Lymph Nodes"}}, {"GSM605706": {"IMMUNIZATION STATUS": "immunized mice (Day 10)", "CELL TYPE": "CXCR5hi PD-1hi YFP-BCL6- cells", "ORGANISM PART": "Lymph Nodes"}}, {"GSM605710": {"IMMUNIZATION STATUS": "immunized mice (Day 7)", "CELL TYPE": "CXCR5lo PD-1lo cells", "ORGANISM PART": "Lymph Nodes"}}, {"GSM605710": {"IMMUNIZATION STATUS": "immunized mice (Day 7)", "CELL TYPE": "CXCR5lo PD-1lo cells", "ORGANISM PART": "Lymph Nodes"}}, {"GSM605710": {"IMMUNIZATION STATUS": "immunized mice (Day 7)", "CELL TYPE": "CXCR5lo PD-1lo cells", "ORGANISM PART": "Lymph Nodes"}}, {"GSM605713": {"IMMUNIZATION STATUS": "na\ufffdve mouse", "CELL TYPE": "Naive CD4+ T cells", "ORGANISM PART": "spleen"}}, {"GSM687179": {"IMMUNIZATION STATUS": "immunized mice (Day 7)", "CELL TYPE": "Bcl6yfp-hetero CXCR5hi PD-1hi", "ORGANISM PART": "Lymph Nodes"}}, {"GSM687179": {"IMMUNIZATION STATUS": "immunized mice (Day 7)", "CELL TYPE": "Bcl6yfp-hetero CXCR5hi PD-1hi", "ORGANISM PART": "Lymph Nodes"}}, {"GSM687179": {"IMMUNIZATION STATUS": "immunized mice (Day 7)", "CELL TYPE": "Bcl6yfp-hetero CXCR5hi PD-1hi", "ORGANISM PART": "Lymph Nodes"}}, {"GSM687182": {"IMMUNIZATION STATUS": "immunized mice (Day 10)", "CELL TYPE": "Bcl6yfp-wt CXCR5hi PD-1hi cells", "ORGANISM PART": "Lymph Nodes"}}, {"GSM687182": {"IMMUNIZATION STATUS": "immunized mice (Day 10)", "CELL TYPE": "Bcl6yfp-wt CXCR5hi PD-1hi cells", "ORGANISM PART": "Lymph Nodes"}}, {"GSM687184": {"IMMUNIZATION STATUS": "immunized mice (Day 7)", "CELL TYPE": "Bcl6yfp-wt CXCR5hi PD-1hi cells", "ORGANISM PART": "Lymph Nodes"}}, {"GSM687185": {"IMMUNIZATION STATUS": "na\ufffdve mouse", "CELL TYPE": "Na\ufffdve CD4+ T cells", "ORGANISM PART": "spleen"}}], "id": 6235, "pop_total": 0, "platform": 6, "summary_wrapped": "We found that a number of Tfh cells downmodulated BCL6 protein after their development, and we sought to compare the gene expression...", "pubmed_id": 21636294, "geo_gse_id": "E-GEOD-24574", "owner_profile": "/profile/8773/arrayexpressuploader", "factor_count": 3, "sample_count": 19, "tags": ["lymph", "protein"], "lastmodified": "Dec.12, 2014", "is_default": false, "geo_id_plat": "E-GEOD-24574_A-AFFY-45", "slug": "expression-data-from-bcl6-yfp-positive-tfh-cells-b", "geo_gds_id": "", "name": "Expression data from BCL6-YFP-positive Tfh cells, BCL6-YFP-negative Tfh cells, non-Tfh cells, and na\u00efve helper T cells.", "created": "Nov.11, 2014", "summary": "We found that a number of Tfh cells downmodulated BCL6 protein after their development, and we sought to compare the gene expression between BCL6-hi Tfh cells and BCL6-low Tfh cells. CD4+ T cells were sorted from immunized and non-immunized mice for RNA extraction and hybridization on Affymetrix microarrays. Bcl6yfp/+ OT-II cells were transferred to congenic recipient mice, and immunized with NP-OVA in CFA subcutaneously. Seven or ten days after immunization, cells were collected from draining lymph nodes, and sorted on FACSAria by the expression of CXCR5, PD-1 and BCL6-YFP. Naive CD4+ T cells were CD4+ CD44lo CD62Lhi cells from unimmunized mice.", "source": "http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-24574", "sample_source": "http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-24574/samples/"}