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Home › Dataset Library › Atorvastatin, rosuvastatin and rifampicin effect on human primary hepatocyte transcriptome [Affymetrix platform]

Dataset: Atorvastatin, rosuvastatin and rifampicin effect on human primary hepatocyte transcriptome [Affymetrix platform]

With particular emphasis on interactions between cholesterol homeostasis and drug metabolism we investigate the transcriptome of human...

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With particular emphasis on interactions between cholesterol homeostasis and drug metabolism we investigate the transcriptome of human primary hepatocytes treated by two commonly prescribed cholesterol lowering drugs atorvastatin and rosuvastatin and by rifampicin that serves as an outgroup as well as a model substance for induction of nuclear receptor PXR. Expression profiling with Affymetrix whole genome arrays shows that statins induce extensive transcriptome changes. 7 condition experiment: 3 treatments (atorvastatin, rifampicin, rosuvastatin), each measured at 2 time points (24 and 48 hours), and untreated cells. 4-6 biological replicates for each condition.

Species:
human

Samples:
40

Source:
E-GEOD-24187

PubMed:
21869732

Updated:
Dec.12, 2014

Registered:
Sep.15, 2014


Factors: (via ArrayExpress)
Sample DONOR AGENT TIME
GSM595029 d089 atorvastatin 24h
GSM595030 d114 atorvastatin 24h
GSM59503 d129 atorvastatin 24h
GSM595032 d269 atorvastatin 24h
GSM595033 d270 atorvastatin 24h
GSM595034 d271 atorvastatin 24h
GSM595035 d089 atorvastatin 48h
GSM595036 d114 atorvastatin 48h
GSM595037 d129 atorvastatin 48h
GSM595038 d269 atorvastatin 48h
GSM595039 d270 atorvastatin 48h
GSM595040 d271 atorvastatin 48h
GSM59504 d089 rifampicin 24h
GSM595042 d114 rifampicin 24h
GSM595043 d129 rifampicin 24h
GSM595044 d269 rifampicin 24h
GSM595045 d270 rifampicin 24h
GSM595046 d271 rifampicin 24h
GSM595047 d089 rifampicin 48h
GSM595048 d114 rifampicin 48h
GSM595049 d129 rifampicin 48h
GSM595050 d269 rifampicin 48h
GSM59505 d270 rifampicin 48h
GSM595052 d271 rifampicin 48h
GSM595053 d089 Rosuvastatin 24h
GSM595054 d114 Rosuvastatin 24h
GSM595055 d129 Rosuvastatin 24h
GSM595056 d269 Rosuvastatin 24h
GSM595057 d270 Rosuvastatin 24h
GSM595058 d271 Rosuvastatin 24h
GSM595059 d114 Rosuvastatin 48h
GSM595060 d269 Rosuvastatin 48h
GSM59506 d270 Rosuvastatin 48h
GSM595062 d271 Rosuvastatin 48h
GSM595063 d089 Untreated 0h
GSM595064 d114 Untreated 0h
GSM595065 d129 Untreated 0h
GSM595066 d269 Untreated 0h
GSM595067 d270 Untreated 0h
GSM595068 d271 Untreated 0h

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