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Home › Dataset Library › Vitamin A nutritional status and retinoic acid as regulators of gene expression in rat liver

Dataset: Vitamin A nutritional status and retinoic acid as regulators of gene expression in rat liver

Vitamin A (retinol) is an essential precursor for the production of retinoic acid (RA), which in turn is a major regulator of gene...

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Vitamin A (retinol) is an essential precursor for the production of retinoic acid (RA), which in turn is a major regulator of gene expression, affecting cell differentiation throughout the body. Understanding how vitamin A nutritional status, as well as therapeutic retinoid treatment, regulates the expression of retinoid homeostatic genes is important for improving dietary recommendations and therapeutic strategies using retinoids. This study investigated genes central to processes of retinoid uptake and storage, release to plasma, and oxidation in the liver of rats under steady-state conditions after different exposures to dietary vitamin A (deficient, marginal, adequate and supplemented), and acutely after administration of a therapeutic dose of all-trans-RA. Over a very wide range of dietary vitamin A, lecithin:retinol acyltransferase (LRAT) as well as multiple cytochrome P450s (CYP26A1, CYP26B1, and CYP2C22) differed by diet and were highly correlated with one another and with vitamin A status assessed by liver retinol concentration (all correlations, P<0.05). After acute treatment with RA, the same genes were rapidly and concomitantly induced, preceding RARß, a classical direct target of RA. CYP26A1 mRNA exhibited the greatest dynamic range (change of log26 in 3 h). Moreover, CYP26A1 increased more rapidly in the liver of RA-primed rats than naïve rats. By in situ hybridization, CYP26A1 mRNA was strongly regulated within hepatocytes, closely resembling RBP4 in location. Overall, whether RA is produced endogenously from retinol or administered exogenously, changes in retinoid homeostatic gene expression simultaneously favor both retinol esterification and RA oxidation, with CYP26A1 exhibiting the greatest dynamic change. All rats were housed in a room maintained at 22°C with a 12-h dark:light cycle, and food and water were freely available. For the Steady-State Vitamin A Study (experiment 1) and the Retinoic Acid 16-hour Kinetic Study (experiment 2), lactating female Sprague-Dawley rats with 12 female pups (purchased from Charles River Laboratories, Willmington, MA) were fed a vitamin A-deficient purified diet [AIN-93G diet, prepared by Research Diets, New Brunswick, NJ] to reduce the transfer of vitamin A in milk from mother to pups prior to the start of the study. For experiment 1, from weaning, the offspring were fed the same diet modified to contain vitamin A at one of four levels: 0 (vitamin A deficient), 0.4 mg retinol/kg diet (vitamin A marginal), 4 mg retinol/kg diet (vitamin A adequate control), or 100 mg retinol/kg diet (vitamin A supplemented). All rats were studied at 8 weeks of age. Rats were euthanized by carbon dioxide asphyxiation and blood and liver were collected rapidly and frozen in liquid nitrogen for storage at -80°C before analysis. In experiment 2, at 8 weeks of age female vitamin A-deficient rats were treated with ~100 ug of All-trans-Retinoic acid (at-RA) for 0 (vehicle only), 3, 6, 10 or 16 h (n=3-4/group). Tissues were collected and RNA was prepared in the same manner as in experiment 1. In the 90-minute "first pass" kinetic study (experiment 3), female rats were purchased at 6 weeks of age and fed a stock rodent diet. When the rats were 8 weeks old they were assigned to a control (naïve) group. Rats in the naive group received an equal amount of vehicle only (vegetable oil/5% ethanol). Food was removed immediately. Sixteen hours after priming, each rat was lightly anesthetized by isoflurane-oxygen inhalation and treated with ~25 ug all-trans-RA bound to albumin [10 ug RA per 100 g bo dy weight], injected into the exposed left common iliac vein. The incision was closed with a surgical staple. The rats were allowed to recover from the anesthesia. Rats were killed at 0 minute (vehicle injection), and 30, 60, and 90 min (n = 3/group) after injection of the RA test dose. Rats were euthanized by carbon dioxide asphyxiation and blood and liver were collected rapidly and frozen in liquid nitrogen for storage at -80°C before analysis. For experiment 1, five biological repeats were Vitamin A deficient, seven biological repeats were Vitamin A marginal, six biological repeats were Vitamin A adequate, and two biological repeats were Vitamin A supplemented. In experiment 2, three biological repeats were performed for each of the following treatments: untreated, at-RA for 3 hours, at-RA for 6 hours and at-RA for 16 hours. Four biological repeats were treated with at-RA for 10 hours. For experiment 3, two biological repeats were untreated and three biological repeats were performed for each of the following at-RA treatment times: 30, 60 and 90 minutes. A total of 47 samples were analyzed.

Species:
rat

Samples:
47

Source:
E-GEOD-24104

Updated:
Feb.09, 2015

Registered:
Jan.08, 2015


Factors: (via ArrayExpress)
Sample REPEAT PROTOCOL STUDY AGENT EXPT AGENT TIME AGENT DOSE MADBID
GSM593215 4 Marginal Steady State Study retinol 1 weaning - 8 weeks 0.4 mg/kg diet 76323
GSM593216 5 Adequate Steady State Study retinol 1 weaning - 8 weeks 4 mg/kg diet 76324
GSM593217 4 Deficient Steady State Study retinol 1 weaning - 8 weeks 0 mg/kg diet 76327
GSM593218 6 Marginal Steady State Study retinol 1 weaning - 8 weeks 0.4 mg/kg diet 76329
GSM593219 6 Adequate Steady State Study retinol 1 weaning - 8 weeks 4 mg/kg diet 76331
GSM593220 2 Supplement Steady State Study retinol 1 weaning - 8 weeks 100 mg/kg diet 76332
GSM59322 7 Marginal Steady State Study retinol 1 weaning - 8 weeks 0.4 mg/kg diet 76334
GSM593222 3 Adequate Steady State Study retinol 1 weaning - 8 weeks 4 mg/kg diet 76335
GSM593223 1 Supplement Steady State Study retinol 1 weaning - 8 weeks 100 mg/kg diet 76336
GSM593224 5 Marginal Steady State Study retinol 1 weaning - 8 weeks 0.4 mg/kg diet 76338
GSM593225 4 Adequate Steady State Study retinol 1 weaning - 8 weeks 4 mg/kg diet 76339
GSM593226 5 Deficient Steady State Study retinol 1 weaning - 8 weeks 0 mg/kg diet 76768
GSM593227 1 at-RA 3 hr Kinetic Study at-RA (All-trans-Retinoic acid) 2 3 hr 100 ug 78695
GSM593228 2 at-RA 3 hr Kinetic Study at-RA (All-trans-Retinoic acid) 2 3 hr 100 ug 78696
GSM593229 3 at-RA 3 hr Kinetic Study at-RA (All-trans-Retinoic acid) 2 3 hr 100 ug 78697
GSM593230 1 at-RA 10 hr Kinetic Study at-RA (All-trans-Retinoic acid) 2 10 hr 100 ug 78698
GSM59323 2 at-RA 10 hr Kinetic Study at-RA (All-trans-Retinoic acid) 2 10 hr 100 ug 78699
GSM593232 3 at-RA 10 hr Kinetic Study at-RA (All-trans-Retinoic acid) 2 10 hr 100 ug 78700
GSM593233 4 at-RA 10 hr Kinetic Study at-RA (All-trans-Retinoic acid) 2 10 hr 100 ug 78701
GSM593234 1 at-RA 6 hr Kinetic Study at-RA (All-trans-Retinoic acid) 2 6 hr 100 ug 78702
GSM593235 2 at-RA 6 hr Kinetic Study at-RA (All-trans-Retinoic acid) 2 6 hr 100 ug 78703
GSM593236 3 at-RA 6 hr Kinetic Study at-RA (All-trans-Retinoic acid) 2 6 hr 100 ug 78704
GSM593237 1 at-RA 16 hr Kinetic Study at-RA (All-trans-Retinoic acid) 2 16 hr 100 ug 78705
GSM593238 2 at-RA 16 hr Kinetic Study at-RA (All-trans-Retinoic acid) 2 16 hr 100 ug 78706
GSM593239 3 at-RA 16 hr Kinetic Study at-RA (All-trans-Retinoic acid) 2 16 hr 100 ug 78707
GSM593240 1 Untreated 0 hr Kinetic Study vehicle only 2 0 hr not specified 78708
GSM59324 2 Untreated 0 hr Kinetic Study vehicle only 2 0 hr not specified 78710
GSM593242 3 Untreated 0 hr Kinetic Study vehicle only 2 0 hr not specified 78711
GSM593243 1 Marginal Steady State Study retinol 1 weaning - 8 weeks 0.4 mg/kg diet 79181
GSM593244 1 Deficient Steady State Study retinol 1 weaning - 8 weeks 0 mg/kg diet 79182
GSM593245 1 Adequate Steady State Study retinol 1 weaning - 8 weeks 4 mg/kg diet 79183
GSM593246 2 Deficient Steady State Study retinol 1 weaning - 8 weeks 0 mg/kg diet 79185
GSM593247 2 Adequate Steady State Study retinol 1 weaning - 8 weeks 4 mg/kg diet 79186
GSM593248 2 Marginal Steady State Study retinol 1 weaning - 8 weeks 0.4 mg/kg diet 79187
GSM593249 3 Deficient Steady State Study retinol 1 weaning - 8 weeks 0 mg/kg diet 79189
GSM593250 3 Marginal Steady State Study retinol 1 weaning - 8 weeks 0.4 mg/kg diet 79190
GSM59325 1 at-RA 30 min Naive Study at-RA (All-trans-Retinoic acid) 3 30 min 25 ug 79888
GSM593252 2 at-RA 30 min Naive Study at-RA (All-trans-Retinoic acid) 3 30 min 25 ug 79889
GSM593253 3 at-RA 30 min Naive Study at-RA (All-trans-Retinoic acid) 3 30 min 25 ug 79890
GSM593254 1 at-RA 90 min Naive Study at-RA (All-trans-Retinoic acid) 3 90 min 25 ug 79891
GSM593255 2 at-RA 90 min Naive Study at-RA (All-trans-Retinoic acid) 3 90 min 25 ug 79892
GSM593256 3 at-RA 90 min Naive Study at-RA (All-trans-Retinoic acid) 3 90 min 25 ug 79893
GSM593257 1 Untreated 0 min Naive Study vehicle only 3 0 min not specified 79894
GSM593258 2 Untreated 0 min Naive Study vehicle only 3 0 min not specified 79895
GSM593259 1 at-RA 60 min Naive Study at-RA (All-trans-Retinoic acid) 3 60 min 25 ug 79896
GSM593260 2 at-RA 60 min Naive Study at-RA (All-trans-Retinoic acid) 3 60 min 25 ug 79897
GSM59326 3 at-RA 60 min Naive Study at-RA (All-trans-Retinoic acid) 3 60 min 25 ug 79898

Tags

  • body
  • cell
  • central
  • common iliac vein
  • left
  • left common iliac vein
  • liquid
  • liver
  • milk
  • vein

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