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Home › Dataset Library › A molecular signature of normal breast epithelial and stromal cells from Li-Fraumeni syndrome mutation carriers

Dataset: A molecular signature of normal breast epithelial and stromal cells from Li-Fraumeni syndrome mutation carriers

Specific changes in gene expression during cancer initiation should enable discovery of biomarkers for risk assessment, early detection...

Registered by ArrayExpress Uploader
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Specific changes in gene expression during cancer initiation should enable discovery of biomarkers for risk assessment, early detection and targets for chemoprevention. It has been previously demonstrated that altered mRNA and proteome signatures of morphologically normal cells bearing a single inherited “hit” in a tumor suppressor gene parallel many changes observed in the corresponding sporadic cancer. Here, we report on the global gene expression profile of morphologically normal, cultured primary breast epithelial and stromal cells from Li-Fraumeni syndrome (LFS) TP53 mutation carriers. Our analyses identified multiple changes in gene expression in both morphologically normal breast epithelial and stromal cells associated with TP53 haploinsufficiency, as well as interlocking pathways. Notably, a dysregulated p53 signaling pathway was readily detectable. Pharmacological intervention with the p53 rescue compounds CP-31398 and PRIMA-1 provided further evidence in support of the central role of p53 in affecting these changes in LFS cells and treatment for this cancer. Because loss of signaling mediated by TP53 is associated with the development and survival of many human tumors, identification of gene expression profiles in morphologically normal cells that carry “one-hit” p53 mutations may reveal novel biomarkers, enabling the discovery of potential targets for chemoprevention of sporadic tumors as well. compare gene expression from different cell types

Species:
human

Samples:
24

Source:
E-GEOD-23994

Updated:
Dec.12, 2014

Registered:
Sep.15, 2014


Factors: (via ArrayExpress)
Sample ID CELL TYPE PHENOTYPE
GSM591056 na epithelial normal
GSM591056 na epithelial normal
GSM591056 na epithelial normal
GSM591056 na epithelial normal
GSM591060 50 epithelial Li-Fraumeni
GSM591060 50 epithelial Li-Fraumeni
GSM591060 50 epithelial Li-Fraumeni
GSM591060 50 epithelial Li-Fraumeni
GSM591064 IUSM epithelial Li-Fraumeni
GSM591064 IUSM epithelial Li-Fraumeni
GSM591064 IUSM epithelial Li-Fraumeni
GSM591064 IUSM epithelial Li-Fraumeni
GSM591068 na stromal normal
GSM591068 na stromal normal
GSM591068 na stromal normal
GSM591068 na stromal normal
GSM591072 50 stromal Li-Fraumeni
GSM591072 50 stromal Li-Fraumeni
GSM591072 50 stromal Li-Fraumeni
GSM591072 50 stromal Li-Fraumeni
GSM591076 IUSM stromal Li-Fraumeni
GSM591076 IUSM stromal Li-Fraumeni
GSM591076 IUSM stromal Li-Fraumeni
GSM591076 IUSM stromal Li-Fraumeni

Tags

  • breast
  • cancer
  • cell
  • central
  • li-fraumeni syndrome
  • syndrome

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