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"AGE": "59.231", "PRECHEMO NODAL STATUS": "0", "PRECHEMO T STAGE": "3", "PRECHEMO TUMOR SIZE": "15"}}, {"GSM590857": {"PCR.V.RD": "RD", "ER POSITIVE VS NEGATIVE": "ERpos", "GRADE": "2", "AGE": "51.461", "PRECHEMO NODAL STATUS": "0", "PRECHEMO T STAGE": "3", "PRECHEMO TUMOR SIZE": "6.5"}}, {"GSM590856": {"PCR.V.RD": "RD", "ER POSITIVE VS NEGATIVE": "ERpos", "GRADE": "3", "AGE": "46.943", "PRECHEMO NODAL STATUS": "1", "PRECHEMO T STAGE": "3", "PRECHEMO TUMOR SIZE": "6"}}, {"GSM590855": {"PCR.V.RD": "pCR", "ER POSITIVE VS NEGATIVE": "ERneg", "GRADE": "3", "AGE": "50.064", "PRECHEMO NODAL STATUS": "1", "PRECHEMO T STAGE": "3", "PRECHEMO TUMOR SIZE": "7.5"}}, {"GSM590854": {"PCR.V.RD": "RD", "ER POSITIVE VS NEGATIVE": "ERpos", "GRADE": "3", "AGE": "53.988", "PRECHEMO NODAL STATUS": "0", "PRECHEMO T STAGE": "3", "PRECHEMO TUMOR SIZE": "6"}}, {"GSM590853": {"PCR.V.RD": "RD", "ER POSITIVE VS NEGATIVE": "ERneg", "GRADE": "2", "AGE": "65.054", "PRECHEMO NODAL STATUS": "1", "PRECHEMO T STAGE": "3", "PRECHEMO TUMOR SIZE": "11"}}, {"GSM590852": {"PCR.V.RD": "RD", "ER POSITIVE VS NEGATIVE": "ERneg", "GRADE": "3", "AGE": "49.010", "PRECHEMO NODAL STATUS": "0", "PRECHEMO T STAGE": "3", "PRECHEMO TUMOR SIZE": "6"}}, {"GSM59085": {"PCR.V.RD": "RD", "ER POSITIVE VS NEGATIVE": "ERneg", "GRADE": "3", "AGE": "40.337", "PRECHEMO NODAL STATUS": "1", "PRECHEMO T STAGE": "2", "PRECHEMO TUMOR SIZE": "5"}}, {"GSM590850": {"PCR.V.RD": "pCR", "ER POSITIVE VS NEGATIVE": "ERneg", "GRADE": "3", "AGE": "43.028", "PRECHEMO NODAL STATUS": "1", "PRECHEMO T STAGE": "3", "PRECHEMO TUMOR SIZE": "8"}}, {"GSM590849": {"PCR.V.RD": "RD", "ER POSITIVE VS NEGATIVE": "ERpos", "GRADE": "3", "AGE": "57.536", "PRECHEMO NODAL STATUS": "1", "PRECHEMO T STAGE": "2", "PRECHEMO TUMOR SIZE": "5"}}, {"GSM590848": {"PCR.V.RD": "pCR", "ER POSITIVE VS NEGATIVE": "ERneg", "GRADE": "3", "AGE": "34.059", "PRECHEMO NODAL STATUS": "0", "PRECHEMO T STAGE": "3", "PRECHEMO TUMOR SIZE": "7"}}, {"GSM590847": {"PCR.V.RD": "RD", "ER POSITIVE VS NEGATIVE": "ERpos", "GRADE": "2", "AGE": "47.118", "PRECHEMO NODAL STATUS": "1", "PRECHEMO T STAGE": "3", "PRECHEMO TUMOR SIZE": "7"}}, {"GSM590846": {"PCR.V.RD": "pCR", "ER POSITIVE VS NEGATIVE": "ERpos", "GRADE": "3", "AGE": "50.771", "PRECHEMO NODAL STATUS": "1", "PRECHEMO T STAGE": "3", "PRECHEMO TUMOR SIZE": "10"}}, {"GSM590845": {"PCR.V.RD": "pCR", "ER POSITIVE VS NEGATIVE": "ERpos", "GRADE": "3", "AGE": "43.775", "PRECHEMO NODAL STATUS": "3", "PRECHEMO T STAGE": "3", "PRECHEMO TUMOR SIZE": "8"}}, {"GSM590844": {"PCR.V.RD": "pCR", "ER POSITIVE VS NEGATIVE": "ERpos", "GRADE": "2", "AGE": "47.099", "PRECHEMO NODAL STATUS": "0", "PRECHEMO T STAGE": "2", "PRECHEMO TUMOR SIZE": "3.5"}}, {"GSM590843": {"PCR.V.RD": "RD", "ER POSITIVE VS NEGATIVE": "ERpos", "GRADE": "2", "AGE": "36.739", "PRECHEMO NODAL STATUS": "1", "PRECHEMO T STAGE": "2", "PRECHEMO TUMOR SIZE": "4"}}, {"GSM590842": {"PCR.V.RD": "pCR", "ER POSITIVE VS NEGATIVE": "ERneg", "GRADE": "3", "AGE": "41.914", "PRECHEMO NODAL STATUS": "1", "PRECHEMO T STAGE": "2", "PRECHEMO TUMOR SIZE": "3"}}, {"GSM59084": {"PCR.V.RD": "RD", "ER POSITIVE VS NEGATIVE": "ERpos", "GRADE": "2", "AGE": "32.197", "PRECHEMO NODAL STATUS": "0", "PRECHEMO T STAGE": "2", "PRECHEMO TUMOR SIZE": "4.5"}}, {"GSM590840": {"PCR.V.RD": "RD", "ER POSITIVE VS NEGATIVE": "ERneg", "GRADE": "NA", "AGE": "46.209", "PRECHEMO NODAL STATUS": "0", "PRECHEMO T STAGE": "3", "PRECHEMO TUMOR SIZE": "6"}}], "ownerprofile_id": "arrayexpress_sid", "platform": 3, "summary_wrapped": "This is Phase II Trial of 4courses of 5-fluorouracil, doxorubicin and cyclophosphamide follwed by 4 additional courses of weekly...", "pubmed_id": 21191116, "geo_gse_id": "E-GEOD-23988", "owner_profile": "/profile/8773/arrayexpressuploader", "factor_count": 7, "sample_count": 61, "tags": ["breast", "breast cancer", "cancer"], "lastmodified": "Dec.12, 2014", "is_default": false, "geo_gds_id": "", "slug": "expression-data-from-breast-cancer-fna-biopsies-2", "geo_id_plat": "E-GEOD-23988_A-AFFY-33", "name": "Expression data from breast cancer FNA biopsies from patients (US samples)", "created": "Jun.19, 2014", "summary": "This is Phase II Trial of 4courses of 5-fluorouracil, doxorubicin and cyclophosphamide follwed by 4 additional courses of weekly docetaxel and capecitabine administered as Preoperative Therapy for Patients with Locally Advanced Breast Cancer, Stages II and III by US oncology (PROTOCOL 02-103) We performed gene set analysis (GSA) using functionally annotated gene sets corresponding to almost all known biological processes in ER-positive/HER2negative and ER-negative/HER2-negative breast cancer, respectively. Pre-treatment FNA from primary tumors were obtained and RNA extracted and hybridized to afymetrix microarrays according to manufacturer protocol.", "source": "http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-23988", "species": "human", "sample_source": "http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-23988/samples/"}