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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="id">3756</item><item key="factors"><item><item key="GSM570896"><item key="genotype">PRF1 protective haplotype: AGA/AGA</item></item></item><item><item key="GSM570896"><item key="genotype">PRF1 protective haplotype: AGA/AGA</item></item></item><item><item key="GSM570896"><item key="genotype">PRF1 protective haplotype: AGA/AGA</item></item></item><item><item key="GSM570896"><item key="genotype">PRF1 protective haplotype: AGA/AGA</item></item></item><item><item key="GSM570900"><item key="genotype">PRF1 risk haplotype: AGG/GAA</item></item></item><item><item key="GSM570900"><item key="genotype">PRF1 risk haplotype: AGG/GAA</item></item></item><item><item key="GSM570900"><item key="genotype">PRF1 risk haplotype: AGG/GAA</item></item></item><item><item key="GSM570900"><item key="genotype">PRF1 risk haplotype: AGG/GAA</item></item></item><item><item key="GSM570900"><item key="genotype">PRF1 risk haplotype: AGG/GAA</item></item></item><item><item key="GSM570900"><item key="genotype">PRF1 risk haplotype: AGG/GAA</item></item></item></item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">4</item><item key="summary_wrapped">A genetic study of the PRF1 gene has shown association of several polymorphisms with multiple sclerosis (MS). Haplotype analysis...</item><item key="pubmed_id">20921521</item><item key="geo_gse_id">E-GEOD-23205</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">1</item><item key="sample_count">10</item><item key="tags"><item>cell</item><item>multiple sclerosis</item><item>ppms</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">transcription-profiling-of-peripheral-blood-from-p</item><item key="geo_id_plat">E-GEOD-23205_A-AFFY-44</item><item key="name">Transcription profiling of peripheral blood from patients with primary progressive multiple sclerosis to compare risk and protective PRF1 haplotypes</item><item key="created">Sep.15, 2014</item><item key="summary">A genetic study of the PRF1 gene has shown association of several polymorphisms with multiple sclerosis (MS). Haplotype analysis identified risk haplotypes strongly associated with male patients having the primary-progressive form of MS (PPMS). Gene expression microarrays were performed in 10 male PPMS patients carrying the risk (n=6) and protective haplotypes (n=4) in order to identify pathways associated with the risk haplotypes. Pathway analysis revealed overrepresentation of the cell killing gene ontology category among down-regulated genes in patients carrying risk haplotypes compared with patients carrying protective haplotypes. Number of samples analyzed: 10 Protective haplotype samples: UOM982, EMA1473, MMC-998, CDP1842 Risk haplotype samples: UUS1554, RAU1550, RPS1011, AGS1013, PFB1530, MGA1014</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-23205</item><item key="species">human</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-23205/samples/</item></data></biogps>
