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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">mouse</item><item key="factors"><item><item key="GSM568514"><item key="SAMPLE TYPE">mutant</item><item key="GENOTYPE">hnf1alpha KO</item></item></item><item><item key="GSM568514"><item key="SAMPLE TYPE">mutant</item><item key="GENOTYPE">hnf1alpha KO</item></item></item><item><item key="GSM568514"><item key="SAMPLE TYPE">mutant</item><item key="GENOTYPE">hnf1alpha KO</item></item></item><item><item key="GSM568585"><item key="SAMPLE TYPE">control littermate</item><item key="GENOTYPE">wildtype</item></item></item><item><item key="GSM568585"><item key="SAMPLE TYPE">control littermate</item><item key="GENOTYPE">wildtype</item></item></item><item><item key="GSM568585"><item key="SAMPLE TYPE">control littermate</item><item key="GENOTYPE">wildtype</item></item></item></item><item key="id">6160</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">6</item><item key="summary_wrapped">Although hepatocyte-nuclear-factor-1&#945; (Hnf1&#945;) is crucial for pancreas and liver functions, it is believed to play a limited functional...</item><item key="geo_gse_id">E-GEOD-23040</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">2</item><item key="sample_count">6</item><item key="tags"><item>cell</item><item>enteroendocrine cell</item><item>epithelial cell</item><item>glucose</item><item>hepatocyte</item><item>intestinal epithelium</item><item>intestine</item><item>jejunum</item><item>liver</item><item>pancreas</item><item>paneth cell</item><item>small intestine</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">loss-of-hepatocyte-nuclear-factor-1-impacts-on-adu</item><item key="geo_id_plat">E-GEOD-23040_A-AFFY-45</item><item key="name">Loss of Hepatocyte-Nuclear-Factor-1&#945; Impacts on Adult Mouse Intestinal Epithelial Cell Growth and Cell Lineages Differentiation</item><item key="created">Nov.11, 2014</item><item key="summary">Although hepatocyte-nuclear-factor-1&#945; (Hnf1&#945;) is crucial for pancreas and liver functions, it is believed to play a limited functional role for intestinal epithelial functions.  The aim of this study was to assess the consequences of abrogating Hnf1&#945; on the maintenance of adult small intestinal epithelial functions.  Methodology/Principal Findings An Hnf1&#945; knockout mouse model was used. Assessment of histological abnormalities, crypt epithelial cell proliferation, epithelial barrier, glucose transport and signalling pathways were measured in these animals.  Changes in global gene expression were also analyzed. Mice lacking Hnf1&#945; displayed increased crypt proliferation and intestinalomegaly as well as a disturbance of intestinal epithelial cell lineages production during adult life.   This phenotype was associated with a decrease of the mucosal barrier function and lumen-to-blood glucose delivery. The mammalian target of rapamycin (mTOR) signalling pathway was found to be overly activated in the small intestine of adult Hnf1&#945; mutant mice.  The intestinal epithelium of Hnf1&#945; null mice displayed a reduction of the enteroendocrine cell population.  An impact was also observed on proper Paneth cell differentiation with abnormalities in the granule exocytosis pathway.  Conclusions/Significance Together, these results unravel a functional role for Hnf1&#945; in regulating adult intestinal growth and sustaining the functions of intestinal epithelial cell lineages. HNF1alpha was knocked out. A total of 3 control and 3 mutant littermate individuals were sacrificed at 4 months of age. The jejunum was harvested and total RNA was isolated from each individual. Each RNA sample was independently used to generate probes to screen Affymetrix chips.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-23040</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-23040/samples/</item></data></biogps>
