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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">human</item><item key="factors"><item><item key="GSM563305"><item key="DISEASE STATE">adjacent normal tissue</item><item key="GENDER">male</item><item key="AGE">64</item><item key="PATIENT">1</item><item key="DIAGNOSIS">control</item></item></item><item><item key="GSM563306"><item key="DISEASE STATE">Pancreatic tumor tissue</item><item key="GENDER">male</item><item key="AGE">64</item><item key="PATIENT">1</item><item key="DIAGNOSIS">Moderately differentiated pancreatic adenocarcinoma with metastasis to lymph nodes</item></item></item><item><item key="GSM563307"><item key="DISEASE STATE">adjacent normal tissue</item><item key="GENDER">female</item><item key="AGE">38</item><item key="PATIENT">2</item><item key="DIAGNOSIS">control</item></item></item><item><item key="GSM563308"><item key="DISEASE STATE">Pancreatic tumor tissue</item><item key="GENDER">female</item><item key="AGE">38</item><item key="PATIENT">2</item><item key="DIAGNOSIS">Undifferentiated small cell carcinoma of the pancreas with metastasis to lymph nodes</item></item></item><item><item key="GSM563309"><item key="DISEASE STATE">adjacent normal tissue</item><item key="GENDER">male</item><item key="AGE">69</item><item key="PATIENT">3</item><item key="DIAGNOSIS">control</item></item></item><item><item key="GSM563310"><item key="DISEASE STATE">Pancreatic tumor tissue</item><item key="GENDER">male</item><item key="AGE">69</item><item key="PATIENT">3</item><item key="DIAGNOSIS">Well differentiated pancreatic adenocarinoma with metastasis to lymph nodes</item></item></item><item><item key="GSM5633"><item key="DISEASE STATE">adjacent normal tissue</item><item key="GENDER">female</item><item key="AGE">69</item><item key="PATIENT">4</item><item key="DIAGNOSIS">control</item></item></item><item><item key="GSM563312"><item key="DISEASE STATE">Pancreatic tumor tissue</item><item key="GENDER">female</item><item key="AGE">69</item><item key="PATIENT">4</item><item key="DIAGNOSIS">Poorly differentiated pancreatic adenocarcinoma; no metastasis to lymph nodes</item></item></item><item><item key="GSM563313"><item key="DISEASE STATE">adjacent normal tissue</item><item key="GENDER">female</item><item key="AGE">65</item><item key="PATIENT">5</item><item key="DIAGNOSIS">control</item></item></item><item><item key="GSM563314"><item key="DISEASE STATE">Pancreatic tumor tissue</item><item key="GENDER">female</item><item key="AGE">65</item><item key="PATIENT">5</item><item key="DIAGNOSIS">Well differentiated pancreatic adenocarcinoma; no metastasis to lymph node</item></item></item><item><item key="GSM563315"><item key="DISEASE STATE">adjacent normal tissue</item><item key="GENDER">female</item><item key="AGE">73</item><item key="PATIENT">6</item><item key="DIAGNOSIS">control</item></item></item><item><item key="GSM563316"><item key="DISEASE STATE">Pancreatic tumor tissue</item><item key="GENDER">female</item><item key="AGE">73</item><item key="PATIENT">6</item><item key="DIAGNOSIS">Pancreatic mucinous cystadenocarcinoma with perineural invasion</item></item></item><item><item key="GSM563317"><item key="DISEASE STATE">adjacent normal tissue</item><item key="GENDER">male</item><item key="AGE">59</item><item key="PATIENT">7</item><item key="DIAGNOSIS">control</item></item></item><item><item key="GSM563318"><item key="DISEASE STATE">Pancreatic tumor tissue</item><item key="GENDER">male</item><item key="AGE">59</item><item key="PATIENT">7</item><item key="DIAGNOSIS">Pancreatic cancer</item></item></item><item><item key="GSM563319"><item key="DISEASE STATE">adjacent normal tissue</item><item key="GENDER">female</item><item key="AGE">52</item><item key="PATIENT">8</item><item key="DIAGNOSIS">control</item></item></item><item><item key="GSM563320"><item key="DISEASE STATE">Pancreatic tumor tissue</item><item key="GENDER">female</item><item key="AGE">52</item><item key="PATIENT">8</item><item key="DIAGNOSIS">Pancreatic adenocarinoma with advanced metastasis</item></item></item></item><item key="id">3734</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">4</item><item key="summary_wrapped">To identify genes in the chromosome 3p12 pathway to tumorigenesis in pancreatic cancer, we screened two expression platforms and then as...</item><item key="geo_gse_id">E-GEOD-22780</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">5</item><item key="sample_count">16</item><item key="tags"><item>adenocarcinoma</item><item>cancer</item><item>chromosome</item><item>pancreatic adenocarcinoma</item><item>pancreatic cancer</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">affymetrix-arrays-interrogated-with-tumornormal-pa</item><item key="geo_id_plat">E-GEOD-22780_A-AFFY-44</item><item key="name">Affymetrix Arrays Interrogated with Tumor/Normal Pancreatic Samples</item><item key="created">Sep.15, 2014</item><item key="summary">To identify genes in the chromosome 3p12 pathway to tumorigenesis in pancreatic cancer, we screened two expression platforms and then as a third platform interrogated pancreatic cancer tumor/normal samples for differential expression.  Data from the third expression platform experiments are shown herein. Frozen tumor and adjacent normal tissue were obtained from untreated, retrospective pancreatic adenocarcinoma samples available from the M. D. Anderson Cancer Center tumor bank and our collaborator (MLF). Total RNA from matched tumor/adjacent normal samples (8 paired samples) was utilized to interrogate the GeneChip U133 plus 2.0 array and resultant bioinformatic analysis performed to identify differentially expressed sequences across all three platforms.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-22780</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-22780/samples/</item></data></biogps>
