ArrayExpress Uploader0human1yr protocol bx - Banff: i/cg/ci=01yr protocol bx - Banff: i/cg/ci=01yr protocol bx - Banff: i/cg/ci=01yr protocol bx - Banff: i/cg/ci=01yr protocol bx - Banff: i/cg/ci=01yr protocol bx - Banff: i/cg/ci=01yr protocol bx - Banff: i/cg/ci=01yr protocol bx - Banff: i/cg/ci=01yr protocol bx - Banff: i/cg/ci=01yr protocol bx - Banff: i/cg/ci=01yr protocol bx - Banff: i/cg/ci=01yr protocol bx - Banff: i/cg/ci=01yr protocol bx - Banff: i/cg/ci=01yr protocol bx - Banff: i/cg/ci=01yr protocol bx - Banff: i/cg/ci=01yr protocol bx - Banff: i/cg/ci=01yr protocol bx - Banff: i/cg/ci=01yr protocol bx - Banff: i/cg/ci=01yr protocol bx - Banff: i/cg/ci=01yr protocol bx - Banff: i/cg/ci=01yr protocol bx - Banff: i/cg/ci=01yr protocol bx - Banff: i/cg/ci=01yr protocol bx - Banff: i/cg/ci=01yr protocol bx - Banff: i/cg/ci=01yr protocol bx - Banff: i/cg/ci=01yr protocol bx - Banff: i/cg=0; ci>01yr protocol bx - Banff: i/cg=0; ci>01yr protocol bx - Banff: i/cg=0; ci>01yr protocol bx - Banff: i/cg=0; ci>01yr protocol bx - Banff: i/cg=0; ci>01yr protocol bx - Banff: i/cg=0; ci>01yr protocol bx - Banff: i/cg=0; ci>01yr protocol bx - Banff: i/cg=0; ci>01yr protocol bx - Banff: i/cg=0; ci>01yr protocol bx - Banff: i/cg=0; ci>01yr protocol bx - Banff: i/cg=0; ci>01yr protocol bx - Banff: i/cg=0; ci>01yr protocol bx - Banff: i/cg=0; ci>01yr protocol bx - Banff: i/cg=0; ci>01yr protocol bx - Banff: i/cg=0; ci>01yr protocol bx - Banff: i/cg=0; ci>01yr protocol bx - Banff: i/cg=0; ci>01yr protocol bx - Banff: i/cg=0; ci>01yr protocol bx - Banff: i/cg=0; ci>01yr protocol bx - Banff: i/cg=0; ci>01yr protocol bx - Banff: i/cg=0; ci>01yr protocol bx - Banff: i/cg=0; ci>01yr protocol bx - Banff: i/cg=0; ci>01yr protocol bx - Banff: i/cg=0; ci>01yr protocol bx - Banff: cg=0; i/ci>01yr protocol bx - Banff: cg=0; i/ci>01yr protocol bx - Banff: cg=0; i/ci>01yr protocol bx - Banff: cg=0; i/ci>01yr protocol bx - Banff: cg=0; i/ci>01yr protocol bx - Banff: cg=0; i/ci>01yr protocol bx - Banff: cg=0; i/ci>01yr protocol bx - Banff: cg=0; i/ci>01yr protocol bx - Banff: cg=0; i/ci>01yr protocol bx - Banff: cg=0; i/ci>01yr protocol bx - Banff: cg=0; i/ci>01yr protocol bx - Banff: cg=0; i/ci>01yr protocol bx - Banff: cg=0; i/ci>01yr protocol bx - Banff: cg=0; i/ci>01yr protocol bx - Banff: cg=0; i/ci>01yr protocol bx - Banff: cg=0; i/ci>03706arrayexpress_sid4We previously observed reduced graft survival for kidney transplants having interstitial fibrosis with subclinical inflammation, but not...E-GEOD-22459/profile/8773/arrayexpressuploader165celldendriticinferiorkidneylymphocytet lymphocyteDec.12, 2014Falsefibrosis-with-inflammation-at-one-year-predicts-trE-GEOD-22459_A-AFFY-44Fibrosis with Inflammation at One Year Predicts Transplant Functional DeclineSep.15, 2014We previously observed reduced graft survival for kidney transplants having interstitial fibrosis with subclinical inflammation, but not fibrosis alone, on 1-year protocol biopsy. The current study aimed to determine whether fibrosis with inflammation at 1 year is associated with renal functional decline in a low-risk transplant cohort and to characterize the nature of the inflammation. Subjects were living-donor, tacrolimus/mycophenolate-treated transplant recipients without overt risk factors for reduced graft survival (n=151). Transplants with normal histology (n=86) or fibrosis alone (n=45) on 1-year protocol biopsy had stable renal function between 1 and 5 years, while those having fibrosis with inflammation (n=20) had declining glomerular filtration rate and reduced graft survival. Immunohistochemistry confirmed increased interstitial T-cells and macrophages/dendritic cells in the fibrosis with inflammation group. Gene expression was performed on a subset of biopsies in each group and demonstrated increased expression of transcripts related to innate and cognate immunity in transplants having fibrosis with inflammation. Pathway- and pathological process-specific analyses of microarray profiles revealed that, in fibrosis with inflammation, over-expressed transcripts were enriched for potentially damaging immunological activities including Toll-like receptor signaling, antigen presentation/dendritic cell maturation, interferon gamma-inducible response, cytotoxic T lymphocyte-associated and acute rejection-associated genes. Thus, fibrosis with inflammation in 1-year protocol biopsies is associated with reduced graft survival and function and with a rejection-like gene expression signature even in recipients with no clinical risk for inferior outcome. Early interventions aimed at altering rejection-like inflammation may favor improved long-term KTx survival. We analyzed gene expression from a group of 65 renal transplant recipients. Patient groups were carefully selected to include patients on the same immunosuppression (Prograf-MMF-Pred), transplant type (LD), absence of over post-transplant complications (AR, BK, DGF). For each patient a 1 year protocol biopsy was examined by conventional histology and gene expression. By histology the patients were categorized as histologically normal (n=25, i/cg/ci=0), IF/TA (n=24, i/cg=0, ci>0) and IFTA+i (n=16, cg=0, i/ci>0).http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-22459http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-22459/samples/