<?xml version="1.0" encoding="ASCII"?>
<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="id">6123</item><item key="factors"><item><item key="GSM55538"><item key="genotype">wild type</item></item></item><item><item key="GSM55538"><item key="genotype">wild type</item></item></item><item><item key="GSM55538"><item key="genotype">wild type</item></item></item><item><item key="GSM55538"><item key="genotype">wild type</item></item></item><item><item key="GSM555385"><item key="genotype">B6.Sle1a.1</item></item></item><item><item key="GSM555385"><item key="genotype">B6.Sle1a.1</item></item></item><item><item key="GSM555385"><item key="genotype">B6.Sle1a.1</item></item></item><item><item key="GSM555385"><item key="genotype">B6.Sle1a.1</item></item></item></item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">6</item><item key="summary_wrapped">Sle1a.1 is part of the Sle1a lupus susceptibility locus which results in the production of activated and autoreactive CD4+ T cells as...</item><item key="pubmed_id">22180614</item><item key="geo_gse_id">E-GEOD-22313</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">1</item><item key="sample_count">8</item><item key="tags"><item>cell</item><item>lupus</item><item>peripheral</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">transcription-profiling-by-array-of-mouse-cd4-t-ce</item><item key="geo_id_plat">E-GEOD-22313_A-AFFY-45</item><item key="name">Transcription profiling by array of mouse CD4+ T cells mutant for Sle1a.1</item><item key="created">Nov.11, 2014</item><item key="summary">Sle1a.1 is part of the Sle1a lupus susceptibility locus which results in the production of activated and autoreactive CD4+ T cells as well as a reduction in the peripheral regulatory T cell (Treg) pool.  Sle1a.1 CD4+ T cells showed a defective response to retinoic acid (RA) expansion of TGF&#946;-induced Tregs.  At the molecular level, Sle1a.1 corresponds to an increased expression of a novel splice isoform of Pbx1, Pbx1-d. Pbx1-d over-expression is sufficient to induce an activated/inflammatory phenotype in Jurkat T cells, and to decrease their apoptotic response to RA.  PBX1-d is expressed more frequently in lupus patients than in healthy controls, and its presence correlates with an increased memory T cell population.  These findings indicate that Pbx1 is a novel lupus susceptibility gene that regulates T cell activation and tolerance. Total RNA from CD4+ T cells from C57BL/6 (B6) and B6.Sle1a.1 (Sle) mice was isolated, with 4 biological replicates each. Gene expression data from C57BL/6 mice were compared with data from B6.Sle2c1 mice.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-22313</item><item key="species">mouse</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-22313/samples/</item></data></biogps>
