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Dataset: Expression profiles of the hippocampus of Rsk2-KO mice

Coffin–Lowry Syndrome (CLS) is a syndromic form of mental retardation caused by loss of function mutations in the X-linked RPS6KA3 gene,...

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Coffin–Lowry Syndrome (CLS) is a syndromic form of mental retardation caused by loss of function mutations in the X-linked RPS6KA3 gene, which encodes Rsk2, a serine/threonine kinase involved in spatial memory. We analyzed hippocampal gene expression profiles in Rsk2-KO mice to identify changes in molecular pathways. Total RNA was extracted from hippocampi from 6 KO and 6 WT (littermates) 2-month-old male mice. For each genotype, equivalent amounts of RNA from 2 mice were pooled and processed for hybridization to the genome wide oligonucleotide microarray (Murine 430A 2.0 Affymetrix, 22.000 probe sets). Thus, 3 independent pooled samples were hybridized for each genotype. We compared hippocampal gene expression profiles from rsk2-KO and normal littermate mice to identify changes in molecular pathways

Species:
mouse

Samples:
6

Source:
E-GEOD-22137

PubMed:
21116650

Updated:
Dec.12, 2014

Registered:
Nov.24, 2014


Factors: (via ArrayExpress)
Sample GENOTYPE/VARIATION
GSM550617 Rsk2-KO
GSM550617 Rsk2-KO
GSM550617 Rsk2-KO
GSM550620 wild type
GSM550620 wild type
GSM550620 wild type

Tags

  • genome
  • serine
  • syndrome
  • threonine

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