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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">mouse</item><item key="factors"><item><item key="GSM540647"><item key="TREATMENT">withdrawal of IL-7</item><item key="GENOTYPE">none</item></item></item><item><item key="GSM540647"><item key="TREATMENT">withdrawal of IL-7</item><item key="GENOTYPE">none</item></item></item><item><item key="GSM540647"><item key="TREATMENT">withdrawal of IL-7</item><item key="GENOTYPE">none</item></item></item><item><item key="GSM540650"><item key="TREATMENT">none</item><item key="GENOTYPE">none</item></item></item><item><item key="GSM540650"><item key="TREATMENT">none</item><item key="GENOTYPE">none</item></item></item><item><item key="GSM540650"><item key="TREATMENT">none</item><item key="GENOTYPE">none</item></item></item><item><item key="GSM540653"><item key="TREATMENT">none</item><item key="GENOTYPE">BCR-ABL1-transformation</item></item></item><item><item key="GSM540653"><item key="TREATMENT">none</item><item key="GENOTYPE">BCR-ABL1-transformation</item></item></item><item><item key="GSM540653"><item key="TREATMENT">none</item><item key="GENOTYPE">BCR-ABL1-transformation</item></item></item><item><item key="GSM540680"><item key="TREATMENT">STI571 in absence of IL-7</item><item key="GENOTYPE">BCR-ABL1-transformation</item></item></item><item><item key="GSM540680"><item key="TREATMENT">STI571 in absence of IL-7</item><item key="GENOTYPE">BCR-ABL1-transformation</item></item></item><item><item key="GSM540680"><item key="TREATMENT">STI571 in absence of IL-7</item><item key="GENOTYPE">BCR-ABL1-transformation</item></item></item><item><item key="GSM540683"><item key="TREATMENT">STI571 in presence of IL-7</item><item key="GENOTYPE">BCR-ABL1-transformation</item></item></item><item><item key="GSM540683"><item key="TREATMENT">STI571 in presence of IL-7</item><item key="GENOTYPE">BCR-ABL1-transformation</item></item></item><item><item key="GSM540683"><item key="TREATMENT">STI571 in presence of IL-7</item><item key="GENOTYPE">BCR-ABL1-transformation</item></item></item></item><item key="id">8473</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">8</item><item key="summary_wrapped">This analysis focused on identifying factors that protect pre-B cells against DNA double strand break (DSB)-mediated DNA damage stress...</item><item key="pubmed_id">20498019</item><item key="geo_gse_id">E-GEOD-21664</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">2</item><item key="sample_count">15</item><item key="tags"><item>cell</item><item>immunoglobulin</item><item>interleukin</item><item>interleukin-7</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_id_plat">E-GEOD-21664_A-AFFY-36</item><item key="slug">transcription-profiling-by-array-of-interleukin-7</item><item key="geo_gds_id"/><item key="name">Transcription profiling by array of interleukin-7-dependent and BCR-ABL1-transformed Mus musculus pre-B cells</item><item key="created">Nov.24, 2014</item><item key="summary">This analysis focused on identifying factors that protect pre-B cells against DNA double strand break (DSB)-mediated DNA damage stress during pre-B cell differentiation. Differentiation of pre-B cells including  immunoglobulin light chain gene recombination were performed by withdrawal of interleukin-7 (IL-7) from IL-7-dependent murine pre-B cells or by inhibition of the BCR-ABL1 kinase activity in BCR-ABL1-transformed pre-B cells. The BCR-ABL1 kinase inhibitor STI571 (Imatinib) was used for the inhibition of BCR-ABL1. IL-7-dependent murine pre-B cells were either cultured in IL-7 (10 ng/ml) or induced to differentiate by withdrawal of IL-7. BCR-ABL1-transformed pre-B cells were either treated with 10 &#181;M STI571 (in absence or presence of 10 ng/ml IL-7) for 16 hours or cultured without STI571. Three samples for each condition were processed.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-21664</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-21664/samples/</item></data></biogps>
