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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">mouse</item><item key="factors"><item><item key="GSM524183 1"/></item><item><item key="GSM524184 1"/></item><item><item key="GSM524185 1"/></item><item><item key="GSM524186 1"/></item><item><item key="GSM524187 1"/></item><item><item key="GSM524188 1"/></item></item><item key="id">6016</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">6</item><item key="summary_wrapped">Hepatocyte-nuclear-factor-4&#945; (&#61472;&#61480;Hnf4&#945;) is a transcription factor that controls epithelial cell polarity and maturation during...</item><item key="geo_gse_id">E-GEOD-20968</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">0</item><item key="sample_count">6</item><item key="tags"><item>cancer</item><item>cell</item><item>colorectal cancer</item><item>distal</item><item>epithelial cell</item><item>gut</item><item>hepatocyte</item><item>intestinal epithelium</item><item>intestine</item><item>jejunum</item><item>point</item><item>protein</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">hepatocyte-nuclear-factor-4a-promotes-gut-neoplasi</item><item key="geo_id_plat">E-GEOD-20968_A-AFFY-45</item><item key="name">Hepatocyte-nuclear-factor-4a promotes gut neoplasia in mice and protects against the production of reactive oxygen species</item><item key="created">Nov.11, 2014</item><item key="summary">Hepatocyte-nuclear-factor-4&#945; (&#61472;&#61480;Hnf4&#945;) is a transcription factor that controls epithelial cell polarity and maturation during embryogenesis.   Hnf4&#945; conditional deletion during post-natal development results in minor consequences on intestinal epithelium integrity but promotes activation of the Wnt/&#946;-catenin pathway. Here we show that Hnf4&#945; does not act as a tumor suppressor gene but is crucial to promote gut tumorigenesis in mice.  Polyp multiplicity in ApcMin mice that lacks Hnf4&#945; is suppressed in comparison to littermate ApcMin controls. Analysis of microarray gene expression profiles from mice lacking Hnf4&#945; in the intestinal epithelium identifies its novel function in regulating the expression of reactive oxygen species (ROS) detoxifying genes.   This role is supported with the demonstration that HNF4&#945; is functionally involved in the protection against spontaneous and 5-fluorouracil chemotherapy-induced production of intracellular ROS in colorectal cancer cell lines.  The analysis of a colorectal cancer patient cohort establishes that HNF4&#945; is significantly up-regulated at both gene transcript and protein levels in tumors relative to adjacent benign epithelial resections. Several genes involved in ROS neutralization are also up-regulated in correlation with HNF4&#945; expression.  All together, the findings point to the nuclear receptor HNF4&#945; as a potential therapeutic target to eradicate aberrant epithelial cell resistance to ROS production during intestinal tumorigenesis. HNF4alpha was conditionally knockout in the mouse epithelial intestine with the 12.4-kb VillinCRE. A total of 3 control and 3 mutant littermates individuals were sacrificed at 7 months of age. The distal jejunum was harvested and Total RNA was isolated from each individuals. Each RNA sample was independently used to generate probes to screen affymetrix chips.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-20968</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-20968/samples/</item></data></biogps>
