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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="id">6002</item><item key="factors"><item><item key="GSM517944"><item key="GENOTYPE">Villin-CRE+ (PPAR g null epithelial cell)</item><item key="TREATMENT DURATION">0</item></item></item><item><item key="GSM517944"><item key="GENOTYPE">Villin-CRE+ (PPAR g null epithelial cell)</item><item key="TREATMENT DURATION">0</item></item></item><item><item key="GSM517944"><item key="GENOTYPE">Villin-CRE+ (PPAR g null epithelial cell)</item><item key="TREATMENT DURATION">0</item></item></item><item><item key="GSM517947"><item key="GENOTYPE">Villin-CRE+ (PPAR g null epithelial cell)</item><item key="TREATMENT DURATION">2</item></item></item><item><item key="GSM517947"><item key="GENOTYPE">Villin-CRE+ (PPAR g null epithelial cell)</item><item key="TREATMENT DURATION">2</item></item></item><item><item key="GSM517947"><item key="GENOTYPE">Villin-CRE+ (PPAR g null epithelial cell)</item><item key="TREATMENT DURATION">2</item></item></item><item><item key="GSM517947"><item key="GENOTYPE">Villin-CRE+ (PPAR g null epithelial cell)</item><item key="TREATMENT DURATION">2</item></item></item><item><item key="GSM517947"><item key="GENOTYPE">Villin-CRE+ (PPAR g null epithelial cell)</item><item key="TREATMENT DURATION">2</item></item></item><item><item key="GSM517952"><item key="GENOTYPE">Villin-CRE+ (PPAR g null epithelial cell)</item><item key="TREATMENT DURATION">7</item></item></item><item><item key="GSM517952"><item key="GENOTYPE">Villin-CRE+ (PPAR g null epithelial cell)</item><item key="TREATMENT DURATION">7</item></item></item><item><item key="GSM517952"><item key="GENOTYPE">Villin-CRE+ (PPAR g null epithelial cell)</item><item key="TREATMENT DURATION">7</item></item></item><item><item key="GSM517952"><item key="GENOTYPE">Villin-CRE+ (PPAR g null epithelial cell)</item><item key="TREATMENT DURATION">7</item></item></item><item><item key="GSM517956"><item key="GENOTYPE">Villin-CRE- (Wild-type epithelial cell)</item><item key="TREATMENT DURATION">0</item></item></item><item><item key="GSM517956"><item key="GENOTYPE">Villin-CRE- (Wild-type epithelial cell)</item><item key="TREATMENT DURATION">0</item></item></item><item><item key="GSM517956"><item key="GENOTYPE">Villin-CRE- (Wild-type epithelial cell)</item><item key="TREATMENT DURATION">0</item></item></item><item><item key="GSM517959"><item key="GENOTYPE">Villin-CRE- (Wild-type epithelial cell)</item><item key="TREATMENT DURATION">2</item></item></item><item><item key="GSM517959"><item key="GENOTYPE">Villin-CRE- (Wild-type epithelial cell)</item><item key="TREATMENT DURATION">2</item></item></item><item><item key="GSM517959"><item key="GENOTYPE">Villin-CRE- (Wild-type epithelial cell)</item><item key="TREATMENT DURATION">2</item></item></item><item><item key="GSM517962"><item key="GENOTYPE">Villin-CRE- (Wild-type epithelial cell)</item><item key="TREATMENT DURATION">7</item></item></item><item><item key="GSM517962"><item key="GENOTYPE">Villin-CRE- (Wild-type epithelial cell)</item><item key="TREATMENT DURATION">7</item></item></item><item><item key="GSM517962"><item key="GENOTYPE">Villin-CRE- (Wild-type epithelial cell)</item><item key="TREATMENT DURATION">7</item></item></item><item><item key="GSM517962"><item key="GENOTYPE">Villin-CRE- (Wild-type epithelial cell)</item><item key="TREATMENT DURATION">7</item></item></item></item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">6</item><item key="summary_wrapped">BACKGROUND: Peroxisome proliferator-activated receptor g (PPAR g) is a nuclear receptor whose activation has been shown to modulate...</item><item key="pubmed_id">20422041</item><item key="geo_gse_id">E-GEOD-20621</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">2</item><item key="sample_count">22</item><item key="tags"><item>body</item><item>cell</item><item>colitis</item><item>colon</item><item>disease</item><item>dss</item><item>epithelial cell</item><item>lymph</item><item>macrophage</item><item>mucosa</item><item>peroxisome</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">transcription-profiling-by-array-of-mus-musculus-c</item><item key="geo_id_plat">E-GEOD-20621_A-AFFY-45</item><item key="name">Transcription profiling by array of Mus musculus colonic mucosa after treatment with DSS</item><item key="created">Nov.11, 2014</item><item key="summary">BACKGROUND: Peroxisome proliferator-activated receptor g (PPAR g) is a nuclear receptor whose activation has been shown to modulate macrophage and epithelial cell-mediated inflammation.  The objective of this study was to use a systems approach for investigating the mechanism by which the deletion of PPAR g in epithelial cells modulates the severity of dextran-sodium sulfate (DSS)-induced colitis, immune cell distribution and global gene expression. RESULTS: The deficiency of PPAR g in epithelial cells does not significantly affect disease activity or body weight but worsens colon histopathlogy. WT mice have greater CD4+IL10+ T cells and fewer MHC II+ macrophages in mesenteric lymph nodes. Global gene expression analysis reveals greater changes after 7 days of DSS challenge (compared to 2 days). Colonic mucosa from VC- (WT) and VC+ (PPARg knock-out in epithelial cells) mice were sampled at 0 (no DSS), 2, and 7 days of DSS-induced experimental colitis</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-20621</item><item key="species">mouse</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-20621/samples/</item></data></biogps>
