Dataset: Transcription profiling by array of Mus musculus colonic mucosa after treatment with DSS
BACKGROUND: Peroxisome proliferator-activated receptor g (PPAR g) is a nuclear receptor whose activation has been shown to modulate...
BACKGROUND: Peroxisome proliferator-activated receptor g (PPAR g) is a nuclear receptor whose activation has been shown to modulate macrophage and epithelial cell-mediated inflammation. The objective of this study was to use a systems approach for investigating the mechanism by which the deletion of PPAR g in epithelial cells modulates the severity of dextran-sodium sulfate (DSS)-induced colitis, immune cell distribution and global gene expression. RESULTS: The deficiency of PPAR g in epithelial cells does not significantly affect disease activity or body weight but worsens colon histopathlogy. WT mice have greater CD4+IL10+ T cells and fewer MHC II+ macrophages in mesenteric lymph nodes. Global gene expression analysis reveals greater changes after 7 days of DSS challenge (compared to 2 days). Colonic mucosa from VC- (WT) and VC+ (PPARg knock-out in epithelial cells) mice were sampled at 0 (no DSS), 2, and 7 days of DSS-induced experimental colitis
- Species:
- mouse
- Samples:
- 22
- Source:
- E-GEOD-20621
- PubMed:
- 20422041
- Updated:
- Dec.12, 2014
- Registered:
- Nov.11, 2014
Sample | GENOTYPE | TREATMENT DURATION |
---|---|---|
GSM517944 | Villin-CRE+ (PPAR g null epithelial cell) | 0 |
GSM517944 | Villin-CRE+ (PPAR g null epithelial cell) | 0 |
GSM517944 | Villin-CRE+ (PPAR g null epithelial cell) | 0 |
GSM517947 | Villin-CRE+ (PPAR g null epithelial cell) | 2 |
GSM517947 | Villin-CRE+ (PPAR g null epithelial cell) | 2 |
GSM517947 | Villin-CRE+ (PPAR g null epithelial cell) | 2 |
GSM517947 | Villin-CRE+ (PPAR g null epithelial cell) | 2 |
GSM517947 | Villin-CRE+ (PPAR g null epithelial cell) | 2 |
GSM517952 | Villin-CRE+ (PPAR g null epithelial cell) | 7 |
GSM517952 | Villin-CRE+ (PPAR g null epithelial cell) | 7 |
GSM517952 | Villin-CRE+ (PPAR g null epithelial cell) | 7 |
GSM517952 | Villin-CRE+ (PPAR g null epithelial cell) | 7 |
GSM517956 | Villin-CRE- (Wild-type epithelial cell) | 0 |
GSM517956 | Villin-CRE- (Wild-type epithelial cell) | 0 |
GSM517956 | Villin-CRE- (Wild-type epithelial cell) | 0 |
GSM517959 | Villin-CRE- (Wild-type epithelial cell) | 2 |
GSM517959 | Villin-CRE- (Wild-type epithelial cell) | 2 |
GSM517959 | Villin-CRE- (Wild-type epithelial cell) | 2 |
GSM517962 | Villin-CRE- (Wild-type epithelial cell) | 7 |
GSM517962 | Villin-CRE- (Wild-type epithelial cell) | 7 |
GSM517962 | Villin-CRE- (Wild-type epithelial cell) | 7 |
GSM517962 | Villin-CRE- (Wild-type epithelial cell) | 7 |