<?xml version="1.0" encoding="ASCII"?>
<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">mouse</item><item key="factors"><item><item key="GSM505624"><item key="SPHINGOSINE KINASE 1 ACTIVITY">  </item><item key="TNFA ACTIVITY">over-expression</item></item></item><item><item key="GSM505624"><item key="SPHINGOSINE KINASE 1 ACTIVITY">  </item><item key="TNFA ACTIVITY">over-expression</item></item></item><item><item key="GSM505626"><item key="SPHINGOSINE KINASE 1 ACTIVITY">normal</item><item key="TNFA ACTIVITY">normal</item></item></item><item><item key="GSM505624"><item key="SPHINGOSINE KINASE 1 ACTIVITY">  </item><item key="TNFA ACTIVITY">over-expression</item></item></item><item><item key="GSM505626"><item key="SPHINGOSINE KINASE 1 ACTIVITY">normal</item><item key="TNFA ACTIVITY">normal</item></item></item><item><item key="GSM505629"><item key="SPHINGOSINE KINASE 1 ACTIVITY">normal</item><item key="TNFA ACTIVITY">over-expression</item></item></item><item><item key="GSM505629"><item key="SPHINGOSINE KINASE 1 ACTIVITY">normal</item><item key="TNFA ACTIVITY">over-expression</item></item></item><item><item key="GSM505629"><item key="SPHINGOSINE KINASE 1 ACTIVITY">normal</item><item key="TNFA ACTIVITY">over-expression</item></item></item></item><item key="id">5968</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">6</item><item key="summary_wrapped">The study analyzes analyzes gene expression changes in the ankle joint in mouse TNFa overexpression models with or without sphingosine...</item><item key="geo_gse_id">E-GEOD-20152</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">2</item><item key="sample_count">8</item><item key="tags"><item>ankle</item><item>ankle joint</item><item>arthritis</item><item>bone</item><item>joint</item><item>protein</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">the-role-of-sphk1-in-htnf-induced-inflammation</item><item key="geo_id_plat">E-GEOD-20152_A-AFFY-45</item><item key="name">The role of SphK1 in hTNF&#945; induced inflammation</item><item key="created">Nov.11, 2014</item><item key="summary">The study analyzes analyzes gene expression changes in the ankle joint in mouse TNFa overexpression models with or without sphingosine kinase 1 activity. SphK1 is a sphingolipid enzyme that converts sphingosine to bioactive sphingosine-1-phosphate (S1P).  Recent data suggest a potential relationship between SphK1 and TNF&#945; and have implicated SphK1/S1P in the development and progression of inflammation.  Here we further study the relationship of TNF&#945; and SphK1 using an in vivo model.  Transgenic hTNF&#945; mice, which develop a spontaneous arthritis (limited to paws) at 20 weeks, were crossed with SphK1 activity null mice (SphK1-/-) to study the development of inflammatory arthritis in the functional absence of SphK1.  Results show that hTNF/SphK1-/- have significantly less severity and progression of arthritis and bone erosions as measured through micro-CT images.  Additionally, less COX-2 protein, mTNF&#945; transcript levels and fewer Th 17 cells were detected in the joints of hTNF/SphK1-/- compared to hTNF/SphK1+/+ mice.  Microarray analysis of the ankle joint showed that hTNF/SphK1-/- mice have increased transcript levels of IL-6 and SOCS3 compared to hTNF/SphK1+/+ mice.  Finally, fewer mature osteoclasts were detected in the ankle joints of hTNF/SphK1-/- mice compared to hTNF/SphK1+/+ mice.  These data show that SphK1 plays a role in hTNF&#945; induced inflammatory arthritis, potentially through a novel pathway involving IL-6 and SOCS3. Two wild-type replicates; three replicates of human TNFa transgene overexpression and normal sphingosine kinase 1; three replicates of human TNFa transgene overexpression and sphingosine kinase 1 null.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-20152</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-20152/samples/</item></data></biogps>
