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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="species">human</item><item key="factors"><item><item key="GSM500988"><item key="DEVELOPMENTAL STAGE">undifferentiated</item><item key="CELL TYPE">Human Embryonic Stem Cells</item></item></item><item><item key="GSM500988"><item key="DEVELOPMENTAL STAGE">undifferentiated</item><item key="CELL TYPE">Human Embryonic Stem Cells</item></item></item><item><item key="GSM500988"><item key="DEVELOPMENTAL STAGE">undifferentiated</item><item key="CELL TYPE">Human Embryonic Stem Cells</item></item></item><item><item key="GSM500988"><item key="DEVELOPMENTAL STAGE">undifferentiated</item><item key="CELL TYPE">Human Embryonic Stem Cells</item></item></item><item><item key="GSM500995"><item key="DEVELOPMENTAL STAGE">adult</item><item key="CELL TYPE">Foreskin Cells Parental</item></item></item><item><item key="GSM500996"><item key="DEVELOPMENTAL STAGE">undifferentiated</item><item key="CELL TYPE">iPS cells from episomal vectors (Defined Factor)</item></item></item><item><item key="GSM500997"><item key="DEVELOPMENTAL STAGE">undifferentiated</item><item key="CELL TYPE">iPS cells from episomal vectors (Defined Factor sub-clone)</item></item></item><item><item key="GSM500997"><item key="DEVELOPMENTAL STAGE">undifferentiated</item><item key="CELL TYPE">iPS cells from episomal vectors (Defined Factor sub-clone)</item></item></item><item><item key="GSM500997"><item key="DEVELOPMENTAL STAGE">undifferentiated</item><item key="CELL TYPE">iPS cells from episomal vectors (Defined Factor sub-clone)</item></item></item><item><item key="GSM500996"><item key="DEVELOPMENTAL STAGE">undifferentiated</item><item key="CELL TYPE">iPS cells from episomal vectors (Defined Factor)</item></item></item><item><item key="GSM50100"><item key="DEVELOPMENTAL STAGE">undifferentiated</item><item key="CELL TYPE">adipose stem cells derived from adult human donor</item></item></item><item><item key="GSM501002"><item key="DEVELOPMENTAL STAGE">adult</item><item key="CELL TYPE">adipose stem cells derived from adult human donor</item></item></item><item><item key="GSM501002"><item key="DEVELOPMENTAL STAGE">adult</item><item key="CELL TYPE">adipose stem cells derived from adult human donor</item></item></item><item><item key="GSM501004"><item key="DEVELOPMENTAL STAGE">undifferentiated</item><item key="CELL TYPE">iPSC derived from hASC using lentiviral reprogramming vector</item></item></item><item><item key="GSM501004"><item key="DEVELOPMENTAL STAGE">undifferentiated</item><item key="CELL TYPE">iPSC derived from hASC using lentiviral reprogramming vector</item></item></item><item><item key="GSM501004"><item key="DEVELOPMENTAL STAGE">undifferentiated</item><item key="CELL TYPE">iPSC derived from hASC using lentiviral reprogramming vector</item></item></item><item><item key="GSM501007"><item key="DEVELOPMENTAL STAGE">undifferentiated</item><item key="CELL TYPE">iPSC derived from hASC using minicircle reprogramming vector</item></item></item><item><item key="GSM501007"><item key="DEVELOPMENTAL STAGE">undifferentiated</item><item key="CELL TYPE">iPSC derived from hASC using minicircle reprogramming vector</item></item></item><item><item key="GSM501007"><item key="DEVELOPMENTAL STAGE">undifferentiated</item><item key="CELL TYPE">iPSC derived from hASC using minicircle reprogramming vector</item></item></item></item><item key="id">3559</item><item key="pop_total">0</item><item key="platform">4</item><item key="summary_wrapped">Owing to the risk of insertional mutagenesis, viral transduction has been increasingly replaced by nonviral methods to generate induced...</item><item key="geo_gse_id">E-GEOD-20033</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">2</item><item key="sample_count">19</item><item key="tags"><item>adipose tissue</item><item>genome</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">minicircle-derived-ips-cells-affymetrix-data</item><item key="geo_id_plat">E-GEOD-20033_A-AFFY-44</item><item key="name">Minicircle-derived iPS cells - Affymetrix Data</item><item key="created">Sep.15, 2014</item><item key="summary">Owing to the risk of insertional mutagenesis, viral transduction has been increasingly replaced by nonviral methods to generate induced pluripotent stem (iPS) cells. We report the use of &#8216;minicircle&#8217; DNA, a vector type that is free of bacterial DNA and capable of high expression in cells. Here we use a single minicircle vector to generate transgene-free iPSCs from adult human adipose stem cells. (Note: Our Nature Methods publication included analysis of array data from GSM378832 (Foreskin),  GSM378833-GSM378838 (JT-iPSC), and GSM378817-GSM378820 (H1, H7, H9, H13, H14) in conjunction with this series). Total RNA from human adipose stem cells (hASC, n = 3 replicate samples),  hASC-derived iPS cells using lentiviral factors (lenti-iPSC, n = 3 replicate samples), and minicircle-derived human iPS cells (mc-iPSC, n = 3 subclones from adipose tissue of three individual patients) was hybridized to nine Affymetrix GeneChip Human Genome U133 Plus 2.0 Arrays.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-20033</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-20033/samples/</item></data></biogps>
