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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="id">3545</item><item key="factors"><item><item key="GSM494403"><item key="HSF1">wild-type</item></item></item><item><item key="GSM494404"><item key="HSF1">chicken HSF1</item></item></item><item><item key="GSM494405"><item key="HSF1">mutated human HSF1</item></item></item><item><item key="GSM494405"><item key="HSF1">mutated human HSF1</item></item></item></item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">4</item><item key="summary_wrapped">To analyze target genes of human heat shock transcription factor 1 (HSF1), we first generated two independent HeLa clones (RDT1 and RDT2)...</item><item key="pubmed_id">20834230</item><item key="geo_gse_id">E-GEOD-19797</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">1</item><item key="sample_count">4</item><item key="tags"><item>amino acid</item><item>cell</item><item>genome</item><item>glutamic acid</item><item>leucine</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">identification-of-genes-up-regulated-by-the-overex</item><item key="geo_id_plat">E-GEOD-19797_A-AFFY-44</item><item key="name">Identification of genes up-regulated by the overexpression of HSF1 in human HeLa cells</item><item key="created">Sep.15, 2014</item><item key="summary">To analyze target genes of human heat shock transcription factor 1 (HSF1), we first generated two independent HeLa clones (RDT1 and RDT2) expressing an actively mutated hHSF1 (hHSF1&#916;RDT), which lacks the regulatory domain that masks its activation domain and possesses a glutamic acid at amino acid 395 instead of a leucine in the suppression domain of the trimerization domain (Fujimoto et al., J. Biol. Chem. 280, 34908-34916, 2005). We also generated a HeLa clone expressing chicken HSF1 (HeLa/cHSF1) to compare its profile of gene expression with those of RDT1 and RDT2 cells (Nakai and Morimoto, Mol. Cell. Biol. 13, 1983-1997, 1993). We then carried out DNA microarray analysis using total RNA isolated from HeLa, HeLa/cHSF1, RDT1, and RDT2 cells grown under normal growth conditions. mRNA levels in human HeLa, RDT1, RDT2, and HeLa/cHSF1 were analyzed by DNA microarray analysis using GeneChip Human Genome U133 Plus 2.0 Array (Affymetrix).</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-19797</item><item key="species">human</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-19797/samples/</item></data></biogps>
