BioGPS
  • Home
  • Help
  • Plugins
  • Datasets
  • Sign Up
  • Login
Examples: Gene Symbol(s), Gene Ontology, Splicing plugins, Melanoma datasets
advanced
Home › Dataset Library › Alpha-synuclein deficiency affects brain Foxp1 expression and ultrasonic vocalization

Dataset: Alpha-synuclein deficiency affects brain Foxp1 expression and ultrasonic vocalization

Alpha-synuclein is an abundant protein implicated in synaptic function and plasticity, but the molecular mechanism of its action is not...

Registered by ArrayExpress Uploader
View Dataset

Alpha-synuclein is an abundant protein implicated in synaptic function and plasticity, but the molecular mechanism of its action is not understood. Missense mutations and gene duplication/triplication events result in Parkinson's disease, a neurodegenerative disorder of old age with impaired movement and emotion control. Here, we systematically investigated the striatal as well as the cerebellar transcriptome profile of alpha-synuclein-deficient mice via a genome-wide microarray survey in order to gain hypothesis-free molecular insights into the physiological function of alpha-synuclein. A genotype-dependent, specific and strong downregulation of forkhead box P1 (Foxp1) transcript levels was observed in all brain regions from postnatal age until old age and could be validated by qPCR. In view of the co-localization and heterodimer formation of FOXP1 with FOXP2, a transcription factor with a well established role for vocalization, and the reported regulation of both alpha-synuclein and FOXP2 expression during avian song learning, we performed a detailed assessment of mouse movements and vocalizations in the postnatal period. While there was no difference in isolation-induced behavioral activity in these animals, the alpha-synuclein-deficient mice exhibited an increased production of isolation-induced ultrasonic vocalizations (USVs). This phenotype might also reflect the reduced expression of the anxiety-related GABA-A receptor subunit gamma 2 (Gabrg2) we observed. Taken together, we identified an early behavioral consequence of alpha-synuclein deficiency and accompanying molecular changes, which supports the notion that the neural connectivity of sound or emotion control systems is affected. Factorial design comparing SNCA knock-out mice with wild type littermates in two different tissues (striatum, cerebellum) at two different timepoints (6 and 21 month)

Species:
mouse

Samples:
26

Source:
E-GEOD-19534

PubMed:
20056137

Updated:
Dec.12, 2014

Registered:
Nov.11, 2014


Factors: (via ArrayExpress)
Sample AGE GENOTYPE ORGANISM PART
GSM487046 6 month postnatal wild type (129S6/SvEvTac) cerebellum
GSM487046 6 month postnatal wild type (129S6/SvEvTac) cerebellum
GSM487046 6 month postnatal wild type (129S6/SvEvTac) cerebellum
GSM487049 6 month postnatal SNCA knockout cerebellum
GSM487049 6 month postnatal SNCA knockout cerebellum
GSM487049 6 month postnatal SNCA knockout cerebellum
GSM487052 6 month postnatal wild type (129S6/SvEvTac) striatum
GSM487052 6 month postnatal wild type (129S6/SvEvTac) striatum
GSM487052 6 month postnatal wild type (129S6/SvEvTac) striatum
GSM487055 6 month postnatal SNCA knockout striatum
GSM487055 6 month postnatal SNCA knockout striatum
GSM487055 6 month postnatal SNCA knockout striatum
GSM487058 21 month postnatal wild type (129S6/SvEvTac) cerebellum
GSM487058 21 month postnatal wild type (129S6/SvEvTac) cerebellum
GSM487058 21 month postnatal wild type (129S6/SvEvTac) cerebellum
GSM487058 21 month postnatal wild type (129S6/SvEvTac) cerebellum
GSM487062 21 month postnatal SNCA knockout cerebellum
GSM487062 21 month postnatal SNCA knockout cerebellum
GSM487062 21 month postnatal SNCA knockout cerebellum
GSM487062 21 month postnatal SNCA knockout cerebellum
GSM487066 21 month postnatal wild type (129S6/SvEvTac) striatum
GSM487066 21 month postnatal wild type (129S6/SvEvTac) striatum
GSM487066 21 month postnatal wild type (129S6/SvEvTac) striatum
GSM487069 21 month postnatal SNCA knockout striatum
GSM487069 21 month postnatal SNCA knockout striatum
GSM487069 21 month postnatal SNCA knockout striatum

Tags

  • brain
  • cerebellum
  • disease
  • genome
  • parkinson's disease
  • protein
  • striatum

Other Formats

JSON    XML
  • About
  • Blog
  • Help
  • FAQ
  • Downloads
  • API
  • iPhone App
  • Email updates
© 2025 The Scripps Research Institute. All rights reserved. (ver 94eefe6 )
  • Terms of Use