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Home › Dataset Library › Gene expression analysis of primitive neuroectodermal tumors

Dataset: Gene expression analysis of primitive neuroectodermal tumors

Central nervous system primitive neuroectodermal tumors (CNS PNET) and medulloblastomas are both embryonal tumors that predominantly...

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Central nervous system primitive neuroectodermal tumors (CNS PNET) and medulloblastomas are both embryonal tumors that predominantly occur in children. We used microarrays to analyse a cohort of CNS PNETs and medulloblastomas to identify gene expression related to tumor subgroups. RNA extracted from 23 frozen tumor samples, plus a commercial fetal brain sample, was analysed using Affymetrix U133 plus 2.0 arrays. Tumour subgroups, based on gene expression, were identified using clustering methods.

Species:
human

Samples:
24

Source:
E-GEOD-19404

Updated:
Dec.12, 2014

Registered:
Jul.12, 2014


Factors: (via ArrayExpress)
Sample TUMOUR TYPE
GSM482098 Normal fetal brain
GSM482097 medulloblastoma
GSM482097 medulloblastoma
GSM482097 medulloblastoma
GSM482097 medulloblastoma
GSM482097 medulloblastoma
GSM482097 medulloblastoma
GSM482097 medulloblastoma
GSM482097 medulloblastoma
GSM482089 atypical teratoid/rhabdoid tumour (ATRT)
GSM482088 Pineoblastoma
GSM482087 CNS PNET
GSM482087 CNS PNET
GSM482087 CNS PNET
GSM482087 CNS PNET
GSM482087 CNS PNET
GSM482087 CNS PNET
GSM482087 CNS PNET
GSM482087 CNS PNET
GSM482087 CNS PNET
GSM482087 CNS PNET
GSM482087 CNS PNET
GSM482087 CNS PNET
GSM482087 CNS PNET

Tags

  • brain
  • central
  • cns pnet
  • nervous system

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