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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="id">5908</item><item key="factors"><item><item key="GSM475930"><item key="PARENTAL GENOTYPE">Cbfb+/MYH11 x C57/Bl6</item><item key="GENOTYPE">Cbfb+/MYH11</item></item></item><item><item key="GSM475930"><item key="PARENTAL GENOTYPE">Cbfb+/MYH11 x C57/Bl6</item><item key="GENOTYPE">Cbfb+/MYH11</item></item></item><item><item key="GSM475930"><item key="PARENTAL GENOTYPE">Cbfb+/MYH11 x C57/Bl6</item><item key="GENOTYPE">Cbfb+/MYH11</item></item></item><item><item key="GSM475930"><item key="PARENTAL GENOTYPE">Cbfb+/MYH11 x C57/Bl6</item><item key="GENOTYPE">Cbfb+/MYH11</item></item></item><item><item key="GSM475934"><item key="PARENTAL GENOTYPE">Cbfb+/MYH11 x C57/Bl6</item><item key="GENOTYPE">Cbfb+/+</item></item></item><item><item key="GSM475934"><item key="PARENTAL GENOTYPE">Cbfb+/MYH11 x C57/Bl6</item><item key="GENOTYPE">Cbfb+/+</item></item></item><item><item key="GSM475934"><item key="PARENTAL GENOTYPE">Cbfb+/MYH11 x C57/Bl6</item><item key="GENOTYPE">Cbfb+/+</item></item></item><item><item key="GSM475934"><item key="PARENTAL GENOTYPE">Cbfb+/MYH11 x C57/Bl6</item><item key="GENOTYPE">Cbfb+/+</item></item></item><item><item key="GSM475938"><item key="PARENTAL GENOTYPE">Cbfb+/- x Cbfb+/-</item><item key="GENOTYPE">Cbfb-/-</item></item></item><item><item key="GSM475938"><item key="PARENTAL GENOTYPE">Cbfb+/- x Cbfb+/-</item><item key="GENOTYPE">Cbfb-/-</item></item></item><item><item key="GSM475938"><item key="PARENTAL GENOTYPE">Cbfb+/- x Cbfb+/-</item><item key="GENOTYPE">Cbfb-/-</item></item></item><item><item key="GSM47594"><item key="PARENTAL GENOTYPE">Cbfb+/- x Cbfb+/-</item><item key="GENOTYPE">Cbfb+/+</item></item></item><item><item key="GSM47594"><item key="PARENTAL GENOTYPE">Cbfb+/- x Cbfb+/-</item><item key="GENOTYPE">Cbfb+/+</item></item></item><item><item key="GSM47594"><item key="PARENTAL GENOTYPE">Cbfb+/- x Cbfb+/-</item><item key="GENOTYPE">Cbfb+/+</item></item></item></item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">6</item><item key="summary_wrapped">It is known that CBFB-MYH11, the fusion gene generated by inversion of chromosome 16 in human acute myeloid leukemia, is causative for...</item><item key="pubmed_id">20007544</item><item key="geo_gse_id">E-GEOD-19194</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">2</item><item key="sample_count">14</item><item key="tags"><item>acute myeloid leukemia</item><item>chromosome</item><item>leukemia</item><item>myeloid leukemia</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">transcription-profiling-by-array-of-mus-musculus-e</item><item key="geo_id_plat">E-GEOD-19194_A-AFFY-45</item><item key="name">Transcription profiling by array of Mus musculus expressing Cbfb-MYH11</item><item key="created">Nov.11, 2014</item><item key="summary">It is known that CBFB-MYH11, the fusion gene generated by inversion of chromosome 16 in human acute myeloid leukemia, is causative for oncogenic transformation. However, the mechanism by which CBFB-MYH11 initiates leukemogenesis is not clear. Previously published reports showed that CBFB-MYH11 dominantly inhibits RUNX1 and CBFB, and such inhibition has been suggested as the mechanism for leukemogenesis. However, knockin mice expressing Cbfb-MYH11 (Cbfb+/MYH11) showed defects in primitive hematopoiesis not seen in Cbfb null (Cbfb-/-) embryos indicating that Cbfb-MYH11 has repression independent activities as well. To identify gene expression changes associated with this novel activity, we compared the gene expression profile in the blood cells of Cbfb+/MYH11 and Cbfb-/- embryonic day 12.5 (E12.5) embryos with that of their wildtype littermates. Cbfb-MYH11 chimeras were mated to C57/Bl6 females to generate Cbfb+/MYH11 (Cbfb+/MYH11) and Cbfb+/+ (WT) embryos. Cbfb+/- x Cbfb+/- matings were used to generate Cbfb+/+ (Cbfb+/+) and Cbfb-/- (Cbfb-/-) embryos. Blood from 8-10 E12.5 embryos of the same genotype was pooled, and RNA was isolated, labeled, and hybridized to Affymetrix Genechip mouse microarray (430 2.0) chips. 4 chips were used for both the Cbfb+/MYH11 and littermate control samples. 3 chips were used for the Cbfb-/- samples and littermate control samples.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-19194</item><item key="species">mouse</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-19194/samples/</item></data></biogps>
