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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">human</item><item key="factors"><item><item key="GSM47049"><item key="GROWTH STAGE">Young</item><item key="OXYGEN GROWTH CONDITIONS">20%</item></item></item><item><item key="GSM47049"><item key="GROWTH STAGE">Young</item><item key="OXYGEN GROWTH CONDITIONS">20%</item></item></item><item><item key="GSM47049"><item key="GROWTH STAGE">Young</item><item key="OXYGEN GROWTH CONDITIONS">20%</item></item></item><item><item key="GSM470494"><item key="GROWTH STAGE">Old</item><item key="OXYGEN GROWTH CONDITIONS">20%</item></item></item><item><item key="GSM470494"><item key="GROWTH STAGE">Old</item><item key="OXYGEN GROWTH CONDITIONS">20%</item></item></item><item><item key="GSM470494"><item key="GROWTH STAGE">Old</item><item key="OXYGEN GROWTH CONDITIONS">20%</item></item></item><item><item key="GSM470497"><item key="GROWTH STAGE">Young</item><item key="OXYGEN GROWTH CONDITIONS">3%</item></item></item><item><item key="GSM470497"><item key="GROWTH STAGE">Young</item><item key="OXYGEN GROWTH CONDITIONS">3%</item></item></item><item><item key="GSM470497"><item key="GROWTH STAGE">Young</item><item key="OXYGEN GROWTH CONDITIONS">3%</item></item></item><item><item key="GSM470500"><item key="GROWTH STAGE">Old</item><item key="OXYGEN GROWTH CONDITIONS">3%</item></item></item><item><item key="GSM470500"><item key="GROWTH STAGE">Old</item><item key="OXYGEN GROWTH CONDITIONS">3%</item></item></item><item><item key="GSM470500"><item key="GROWTH STAGE">Old</item><item key="OXYGEN GROWTH CONDITIONS">3%</item></item></item></item><item key="id">3494</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">4</item><item key="summary_wrapped">Senescent is an irreversible form of cell cycle arrest initiated by damaged cell constituents and subsequent pro-oncogenic signaling....</item><item key="geo_gse_id">E-GEOD-19018</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">2</item><item key="sample_count">12</item><item key="tags"><item>cell</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">changes-in-gene-expression-of-imr90-cells-with-age</item><item key="geo_id_plat">E-GEOD-19018_A-AFFY-44</item><item key="name">Changes in gene expression of Imr90 cells with age and senescence under 3% and 20% oxygen growth conditions</item><item key="created">Sep.15, 2014</item><item key="summary">Senescent is an irreversible form of cell cycle arrest initiated by damaged cell constituents and subsequent pro-oncogenic signaling.  Replicative senescence in vitro can be considered a model for human aging.  When fibroblasts are cultured under atmospheric oxygen conditions of 20%, typical of normal tissue culture procedure, fibroblasts generally reach their replicative capacity at 50-60 population doublings (PDs).  When fibroblasts are cultured under normal physiological oxygen conditions of 3%, PDs increase about 30% relative to atmospheric levels.  Hence while oxygen is a requirement for normal aerobic respiration, it can contribute to the total amount of oxidative stress to which cells are exposed to, leading to a long-term adverse effect in vitro.  Inasmuch, cultures maintained under hyperoxic and hypoxic conditions provide a convenient model system for assessing the relationship between oxygen/oxidative stress and senescence. We used microarrays to profile the changes in global gene expression during aging and senescence of Imr90 cells under growth oxygen conditions of 3% and 20%. Imr90 cells at various population doubling timepoints (young, old, and senescent) grown seperately under 3 and 20% oxygen growth conditions were selected for RNA extraction and hybridization on Affymetrix microarrays.  Timepoints from cells grown under 3% and 20% oxygen conditions were age matched via population doublings to ensure accurate cross sample comparison.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-19018</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-19018/samples/</item></data></biogps>
