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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">human</item><item key="factors"><item><item key="GSM463920"><item key="CELL LINE">not specified</item><item key="ORGANISM PART">bone marrow</item></item></item><item><item key="GSM46392"><item key="CELL LINE">not specified</item><item key="ORGANISM PART">cerebellum</item></item></item><item><item key="GSM463922"><item key="CELL LINE">not specified</item><item key="ORGANISM PART">colon</item></item></item><item><item key="GSM463923"><item key="CELL LINE">not specified</item><item key="ORGANISM PART">cortex</item></item></item><item><item key="GSM463924"><item key="CELL LINE">not specified</item><item key="ORGANISM PART">fetal brain</item></item></item><item><item key="GSM463925"><item key="CELL LINE">not specified</item><item key="ORGANISM PART">heart</item></item></item><item><item key="GSM463926"><item key="CELL LINE">not specified</item><item key="ORGANISM PART">kidney</item></item></item><item><item key="GSM463927"><item key="CELL LINE">not specified</item><item key="ORGANISM PART">liver</item></item></item><item><item key="GSM463928"><item key="CELL LINE">not specified</item><item key="ORGANISM PART">lung</item></item></item><item><item key="GSM463929"><item key="CELL LINE">not specified</item><item key="ORGANISM PART">pancreas</item></item></item><item><item key="GSM463930"><item key="CELL LINE">not specified</item><item key="ORGANISM PART">prostate</item></item></item><item><item key="GSM46393"><item key="CELL LINE">not specified</item><item key="ORGANISM PART">salivary gland</item></item></item><item><item key="GSM463932"><item key="CELL LINE">not specified</item><item key="ORGANISM PART">skeletal muscle</item></item></item><item><item key="GSM463933"><item key="CELL LINE">not specified</item><item key="ORGANISM PART">small intestine</item></item></item><item><item key="GSM463934"><item key="CELL LINE">not specified</item><item key="ORGANISM PART">spinal cord</item></item></item><item><item key="GSM463935"><item key="CELL LINE">not specified</item><item key="ORGANISM PART">spleen</item></item></item><item><item key="GSM463936"><item key="CELL LINE">not specified</item><item key="ORGANISM PART">stomach</item></item></item><item><item key="GSM463937"><item key="CELL LINE">not specified</item><item key="ORGANISM PART">testes</item></item></item><item><item key="GSM463938"><item key="CELL LINE">not specified</item><item key="ORGANISM PART">thymus</item></item></item><item><item key="GSM463939"><item key="CELL LINE">not specified</item><item key="ORGANISM PART">thyroid</item></item></item><item><item key="GSM463940"><item key="CELL LINE">not specified</item><item key="ORGANISM PART">trachea</item></item></item><item><item key="GSM46394"><item key="CELL LINE">not specified</item><item key="ORGANISM PART">uterus</item></item></item><item><item key="GSM463942"><item key="CELL LINE">HeLa cells</item><item key="ORGANISM PART">not specified</item></item></item><item><item key="GSM463943"><item key="CELL LINE">SH-SY5Y cells</item><item key="ORGANISM PART">not specified</item></item></item></item><item key="id">3444</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">4</item><item key="summary_wrapped">We performed tiling array experiments to examine whole genome expression in human tissues. We investigated tissue specificity and...</item><item key="geo_gse_id">E-GEOD-18490</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">2</item><item key="sample_count">24</item><item key="tags"><item>bone</item><item>bone marrow</item><item>brain</item><item>cell</item><item>cerebellum</item><item>colon</item><item>cortex</item><item>genome</item><item>gland</item><item>heart</item><item>intestine</item><item>kidney</item><item>liver</item><item>lung</item><item>muscle</item><item>pancreas</item><item>prostate</item><item>salivary gland</item><item>small intestine</item><item>spinal cord</item><item>spleen</item><item>stomach</item><item>thymus</item><item>trachea</item><item>uterus</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">whole-genome-transcriptional-profile-of-human-tiss</item><item key="geo_id_plat">E-GEOD-18490_A-AFFY-44</item><item key="name">Whole genome transcriptional profile of human tissues and cells</item><item key="created">Sep.15, 2014</item><item key="summary">We performed tiling array experiments to examine whole genome expression in human tissues. We investigated tissue specificity and association between evolutionary sequence conservation and transcription.  A total of 22 tissues (bone marrow, cerebellum, colon, cortex, fetal brain, heart, kidney, liver, lung, pancreas, prostate, salivary gland, skeletal muscle, small intestine, spinal cord, spleen, stomach, testes, thymus, thyroid, trachea and uterus) and 2 cell lines (HeLa and SH-SY5Y) were examined in 36783546 regions of the Human genome in this study.  Keywords: whole genome transcription, tiling array, non-coding transcripts, tissue specificity Total RNA isolated from Human tissues and cell cultures were labeled and hybridized to the GeneChip Human Tiling 1.0R Array set of 14 chips (24 samples x 14  = 336 chips total) according to the manufacturer's protocol.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-18490</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-18490/samples/</item></data></biogps>
