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Home › Dataset Library › Expression data from human iPS cells and fibroblasts

Dataset: Expression data from human iPS cells and fibroblasts

DNA methylation is often inversely correlated with gene expression. We used expression microarrays to determine the relationship between...

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DNA methylation is often inversely correlated with gene expression. We used expression microarrays to determine the relationship between DNA methylation and gene expression in 6 iPS cell lines and the fibroblasts from which they were derived. We isolated RNA from iPS cells and fibroblasts for which we have genome-wide DNA methylation data and hybridized to Affymetrix gene expression microarrays.

Species:
human

Samples:
12

Source:
E-GEOD-18226

PubMed:
19881528

Updated:
Dec.12, 2014

Registered:
Sep.15, 2014


Factors: (via ArrayExpress)
Sample CELL LINE BIOSOURCEPROVIDER
GSM452726 GM04981 from Coriell Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM04981
GSM452727 iPS cells derived from DMD not specified
GSM452728 iPS cells derived from GD not specified
GSM452729 iPS cells derived from 551 not specified
GSM452730 Detroit 551 fetal skin fibroblast from ATCC not specified
GSM45273 iPS cells derived from PD not specified
GSM452732 iPS cells derived from SBDS not specified
GSM452733 iPS cells derived from MRC5 not specified
GSM452734 DF250 not specified
GSM452735 GM00852A from Coriell Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM00852
GSM452736 14 week old fetal lung fibroblast from ATCC not specified
GSM452737 Parental cells for PD-iPS5 not specified

Tags

  • cell
  • genome

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