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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">mouse</item><item key="factors"><item><item key="GSM455430"><item key="GENDER">female</item><item key="GENOTYPE">Gnmt knockout</item></item></item><item><item key="GSM45543"><item key="GENDER">female</item><item key="GENOTYPE">wild-type</item></item></item><item><item key="GSM455432"><item key="GENDER">male</item><item key="GENOTYPE">Gnmt knockout</item></item></item><item><item key="GSM455433"><item key="GENDER">male</item><item key="GENOTYPE">wild-type</item></item></item></item><item key="id">5834</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">6</item><item key="summary_wrapped">We report that liver nodules from 5/8 (62.5%) male and 4/5 (80%) female Gnmt-/- mice were diagnosed as having HCC. Microarray analysis...</item><item key="geo_gse_id">E-GEOD-18218</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">2</item><item key="sample_count">4</item><item key="tags"><item>cancer</item><item>cell</item><item>hcc</item><item>liver</item><item>liver cancer</item><item>protein</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">expression-data-from-afb1-treated-gnmt-knockout-mi</item><item key="geo_id_plat">E-GEOD-18218_A-AFFY-45</item><item key="name">Expression data from AFB1-treated GNMT knockout mice</item><item key="created">Nov.11, 2014</item><item key="summary">We report that liver nodules from 5/8 (62.5%) male and 4/5 (80%) female Gnmt-/- mice were diagnosed as having HCC. Microarray analysis showed that genes involved in the following pathways were deregulated in different stages of tumorigenesis: Methylation, metabolism, signal transduction, cell proliferation, and cell adhesion. This study reveals that GNMT plays an important role in the prevention of hepatotumorigenesis through regulating detoxification pathways. We postulate that GNMT is a stress-responsive protein and its expression may account for the gender difference of the susceptibility to liver cancer. Liver tissues from aflatoxin B1 (AFB1)-treated wild-type or Gnmt knockout mice at 11weeks old were used for RNA extraction and hybridization on Affymetrix microarrays. Total RNA were mixed in equal proportion from 3 mice.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-18218</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-18218/samples/</item></data></biogps>
